RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 OR9Q1Q8NGQ5 310 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 RNPC3Q96LT9 517 aaKnown RBP17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 STOML1Q9UBI4 398 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 C12orf60Q5U649 245 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 RRM2BQ7LG56 351 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 TADA2BQ86TJ2 420 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 NLRP14Q86W24 1093 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 TRAPPC3O43617 180 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 ASMTLO95671 621 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 HNRNPH2P55795 449 aaKnown RBP17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 E2F4Q16254 413 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 C16orf87Q6PH81 154 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 ZNF507Q8TCN5 953 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 CUL3Q13618 768 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 NUDT18Q6ZVK8 323 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 PPP1R36Q96LQ0 422 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 NDE1Q9NXR1 346 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 SNX9Q9Y5X1 595 aa17.11■□□□□ 0.33
SH3TC1-210ENST00000506360 CHRNA5P30532 468 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 RGS7P49802 495 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 C18orf8Q96DM3 657 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 CLMNQ96JQ2 1002 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 IQCA1LA6NCM1 817 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 CTSHP09668 335 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 GFAPP14136 432 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 ACOT2P49753 483 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 DAB2P98082 770 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 MAPRE2Q15555 327 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 ANKS3Q6ZW76 656 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 MFN1Q8IWA4 741 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 HPS3Q969F9 1004 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 RUBCNLQ9H714 662 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 ALG13Q9NP73 1137 aaKnown RBP17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 USP27XA6NNY8 438 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 PDHA1P08559 390 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 SCARF1Q14162 830 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 SYTL3Q4VX76 610 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 CPA5Q8WXQ8 436 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 AGAP3Q96P47 875 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 TIPINQ9BVW5 301 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 AMACRQ9UHK6 382 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 ZNF189O75820 626 aaPredicted RBP17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 KCNB1Q14721 858 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 COG2Q14746 738 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 PATL1Q86TB9 770 aaKnown RBP17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 EFHBQ8N7U6 833 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 TSC22D3Q99576 134 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 SH2D3AQ9BRG2 576 aa17.1■□□□□ 0.33
SH3TC1-210ENST00000506360 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 KIAA0391O15091 583 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 KCNQ2O43526 872 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 TADA2AO75478 443 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 HMBSP08397 361 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 SLC30A5Q8TAD4 765 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 UNC45AQ9H3U1 944 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 SENP1Q9P0U3 644 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 MAD2L2Q9UI95 211 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 CCDC22O60826 627 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 PDIA5Q14554 519 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 RFX8Q6ZV50 586 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 CLCA2Q9UQC9 943 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 RBP5P82980 135 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 GRAMD4Q6IC98 578 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 RCOR2Q8IZ40 523 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 USP33Q8TEY7 942 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 NSUN4Q96CB9 384 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 ETNK1Q9HBU6 452 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 CDV3Q9UKY7 258 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 TLR2O60603 784 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 RARBP10826 455 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 GTF2H3Q13889 308 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 TMEM132DQ14C87 1099 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 DGAT1O75907 488 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 XKR3Q5GH77 459 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 ICA1LQ8NDH6 482 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 ATL2Q8NHH9 583 aa17.09■□□□□ 0.33
SH3TC1-210ENST00000506360 C3orf70A6NLC5 250 aaPredicted RBP17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 MAP4P27816 1152 aaKnown RBP17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 PDAP1Q13442 181 aaKnown RBP17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 COBLL1Q53SF7 1204 aa17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 FBXO2Q9UK22 296 aaPredicted RBP17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 ALDH1A1P00352 501 aa17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 HMOX2P30519 316 aa17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 BAATQ14032 418 aaPredicted RBP17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 MTHFD1LQ6UB35 978 aa17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 ANO5Q75V66 913 aa17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 RFWD2Q8NHY2 731 aa17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 OTULINQ96BN8 352 aa17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 OTUB1Q96FW1 271 aaPredicted RBP17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 EPC1Q9H2F5 836 aa17.08■□□□□ 0.33
SH3TC1-210ENST00000506360 APEX2Q9UBZ4 518 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms