RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 AXDND1Q5T1B0 1012 aaPredicted RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 PHLDB3Q6NSJ2 640 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 TSSK4Q6SA08 328 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 TPRG1Q6ZUI0 275 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 FBXL16Q8N461 479 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 NECAB1Q8N987 351 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 DEPTORQ8TB45 409 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 ITFG1Q8TB96 612 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 WASF1Q92558 559 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 FGF13Q92913 245 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 SECISBP2LQ93073 1101 aaKnown RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 POLD4Q9HCU8 107 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 CHST7Q9NS84 486 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 ANKEF1Q9NU02 776 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 PRMT7Q9NVM4 692 aaPredicted RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 NDRG2Q9UN36 371 aaKnown RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 MRPS23Q9Y3D9 190 aaKnown RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 MTF2Q9Y483 593 aaPredicted RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 PATJQ8NI35 1801 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 KANSL1LA0AUZ9 987 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 ARHGEF35A5YM69 484 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 ANHXE9PGG2 379 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 I3L4J1 428 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 PRRG1O14668 218 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 ADAM12O43184 909 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 NEMFO60524 1076 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 RECQL4O94761 1208 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 PRKCBP05771 671 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 MCM7P33993 719 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 RARRES1P49788 294 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 OSTNP61366 133 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 GSE1Q14687 1217 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 PCBP1Q15365 356 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNF8-204ENST00000506104 LPAL2Q16609 132 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 AMHR2Q16671 573 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 LILRA6Q6PI73 481 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 RNF168Q8IYW5 571 aaPredicted RBP9.11□□□□□ -0.95
SNF8-204ENST00000506104 CLSTN3Q9BQT9 956 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 CXCL16Q9H2A7 254 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 SLC2A4RGQ9NR83 387 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 FBXW11Q9UKB1 542 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 CDY1Q9Y6F8 540 aa9.11□□□□□ -0.95
SNF8-204ENST00000506104 ZFP37Q9Y6Q3 630 aaPredicted RBP9.11□□□□□ -0.95
SNF8-204ENST00000506104 EP300Q09472 2414 aaPredicted RBP9.11□□□□□ -0.95
SNF8-204ENST00000506104 CITO14578 2027 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 TICRRQ7Z2Z1 1910 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 A0A1B0GUA9 196 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 TTLL13PA6NNM8 815 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 NCAM2O15394 837 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 B3GAT3O94766 335 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 LRG1P02750 347 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 HNRNPA1P09651 372 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNF8-204ENST00000506104 HARSP12081 509 aaKnown RBP9.1□□□□□ -0.95
SNF8-204ENST00000506104 GLULP15104 373 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 STARD6P59095 220 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 PFKPQ01813 784 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 GUCY1B3Q02153 619 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 ELAVL2Q12926 359 aaKnown RBP9.1□□□□□ -0.95
SNF8-204ENST00000506104 GNL2Q13823 731 aaKnown RBP9.1□□□□□ -0.95
SNF8-204ENST00000506104 GRM2Q14416 872 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 MAPK6Q16659 721 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
SNF8-204ENST00000506104 ZBTB41Q5SVQ8 909 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 PDXDC1Q6P996 788 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 FAM177A1Q8N128 213 aaPredicted RBP9.1□□□□□ -0.95
SNF8-204ENST00000506104 GSTCDQ8NEC7 633 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 LNX1Q8TBB1 728 aaPredicted RBP9.1□□□□□ -0.95
SNF8-204ENST00000506104 IFT74Q96LB3 600 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 CORO1BQ9BR76 489 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 C2orf40Q9H1Z8 148 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 PDZD7Q9H5P4 517 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 GOLGA2P5Q9HBQ8 144 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 LTB4R2Q9NPC1 389 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 DNMT3BQ9UBC3 853 aaKnown RBP9.1□□□□□ -0.95
SNF8-204ENST00000506104 RAB23Q9ULC3 237 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 TPCN1Q9ULQ1 816 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 PDCD11Q14690 1871 aaKnown RBP9.1□□□□□ -0.95
SNF8-204ENST00000506104 NOTCH4Q99466 2003 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 MYH11P35749 1972 aa9.1□□□□□ -0.95
SNF8-204ENST00000506104 STK36Q9NRP7 1315 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 CFAP54Q96N23 3096 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 CCDC169A6NNP5 214 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 BTBD18B2RXH4 712 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 PFKFB2O60825 505 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 TKTP29401 623 aaKnown RBP9.09□□□□□ -0.95
SNF8-204ENST00000506104 BRCC3P46736 316 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 CLCNKBP51801 687 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 PRKCQQ04759 706 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 SPIRE1Q08AE8 756 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 EEF1DP3Q658K8 133 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 PADI6Q6TGC4 694 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.09□□□□□ -0.95
SNF8-204ENST00000506104 PRR23BQ6ZRT6 265 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 DIS3L2Q8IYB7 885 aaKnown RBP9.09□□□□□ -0.95
SNF8-204ENST00000506104 MCPH1Q8NEM0 835 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 ERMNQ8TAM6 284 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 PIK3R5Q8WYR1 880 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 KIFC3Q9BVG8 833 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 RHOBTB2Q9BYZ6 727 aa9.09□□□□□ -0.95
SNF8-204ENST00000506104 PLA2G2FQ9BZM2 168 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms