RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 NT5DC1Q5TFE4 455 aa27.16■■□□□ 1.94
HERC4-212ENST00000505760 KRT79Q5XKE5 535 aa27.16■■□□□ 1.94
HERC4-212ENST00000505760 PIK3R5Q8WYR1 880 aa27.16■■□□□ 1.94
HERC4-212ENST00000505760 EPS15L1Q9UBC2 864 aa27.16■■□□□ 1.94
HERC4-212ENST00000505760 KIF3AQ9Y496 699 aa27.16■■□□□ 1.94
HERC4-212ENST00000505760 LAD1O00515 517 aa27.15■■□□□ 1.94
HERC4-212ENST00000505760 ZMYND10O75800 440 aa27.15■■□□□ 1.94
HERC4-212ENST00000505760 PAPLNO95428 1278 aa27.15■■□□□ 1.94
HERC4-212ENST00000505760 PDXDC1Q6P996 788 aa27.15■■□□□ 1.94
HERC4-212ENST00000505760 MYADMQ96S97 322 aa27.15■■□□□ 1.94
HERC4-212ENST00000505760 CLSTN3Q9BQT9 956 aa27.15■■□□□ 1.94
HERC4-212ENST00000505760 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.15■■□□□ 1.944e-7■□□□□ 10.5
HERC4-212ENST00000505760 ZFHX2Q9C0A1 2572 aaPredicted RBP27.14■■□□□ 1.94
HERC4-212ENST00000505760 VWA8A3KMH1 1905 aa27.14■■□□□ 1.94
HERC4-212ENST00000505760 E9PMD0 336 aa27.14■■□□□ 1.94
HERC4-212ENST00000505760 PEX3P56589 373 aa27.14■■□□□ 1.94
HERC4-212ENST00000505760 C8orf34Q49A92 452 aa27.14■■□□□ 1.94
HERC4-212ENST00000505760 GLRA4Q5JXX5 417 aa27.14■■□□□ 1.94
HERC4-212ENST00000505760 LIN9Q5TKA1 542 aa27.14■■□□□ 1.94
HERC4-212ENST00000505760 GET4Q7L5D6 327 aaPredicted RBP27.14■■□□□ 1.94
HERC4-212ENST00000505760 LNX1Q8TBB1 728 aaPredicted RBP27.14■■□□□ 1.94
HERC4-212ENST00000505760 RSAD2Q8WXG1 361 aa27.14■■□□□ 1.94
HERC4-212ENST00000505760 MYO15AQ9UKN7 3530 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 PP2D1A8MPX8 630 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 NPTX2P47972 431 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 DMP1Q13316 513 aaPredicted RBP27.13■■□□□ 1.93
HERC4-212ENST00000505760 MCTP1Q6DN14 999 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 DTHD1Q6ZMT9 781 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 SIX5Q8N196 739 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 FBXW11Q9UKB1 542 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 TNFSF13BQ9Y275 285 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 PHLPP2Q6ZVD8 1323 aa27.13■■□□□ 1.93
HERC4-212ENST00000505760 DOCK6Q96HP0 2047 aa27.12■■□□□ 1.93
HERC4-212ENST00000505760 NARSO43776 548 aaKnown RBP27.12■■□□□ 1.93
HERC4-212ENST00000505760 HIP1RO75146 1068 aa27.12■■□□□ 1.93
HERC4-212ENST00000505760 B3GAT3O94766 335 aa27.12■■□□□ 1.93
HERC4-212ENST00000505760 CDC25AP30304 524 aa27.12■■□□□ 1.93
HERC4-212ENST00000505760 PRPHP41219 470 aa27.12■■□□□ 1.93
HERC4-212ENST00000505760 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.12■■□□□ 1.93
HERC4-212ENST00000505760 NXPE3Q969Y0 559 aa27.12■■□□□ 1.93
HERC4-212ENST00000505760 DRC1Q96MC2 740 aa27.12■■□□□ 1.93
HERC4-212ENST00000505760 PPP1R10Q96QC0 940 aaKnown RBP27.12■■□□□ 1.93
HERC4-212ENST00000505760 LAMP2P13473 410 aa27.11■■□□□ 1.93
HERC4-212ENST00000505760 YARSP54577 528 aaKnown RBP27.11■■□□□ 1.93
HERC4-212ENST00000505760 RABEP1Q15276 862 aa27.11■■□□□ 1.93
HERC4-212ENST00000505760 PPM1LQ5SGD2 360 aa27.11■■□□□ 1.93
HERC4-212ENST00000505760 CWF19L1Q69YN2 538 aaKnown RBP27.11■■□□□ 1.93
HERC4-212ENST00000505760 ACO2Q99798 780 aaKnown RBP27.11■■□□□ 1.93
HERC4-212ENST00000505760 CCDC94Q9BW85 323 aaPredicted RBP27.11■■□□□ 1.93
HERC4-212ENST00000505760 MRPL4Q9BYD3 311 aaKnown RBP27.11■■□□□ 1.93
HERC4-212ENST00000505760 KMT5AQ9NQR1 393 aa27.11■■□□□ 1.93
HERC4-212ENST00000505760 TOPORSQ9NS56 1045 aaPredicted RBP27.11■■□□□ 1.93
HERC4-212ENST00000505760 VPS13AQ96RL7 3174 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 TMEM189-UBE2V1I3L0A0 370 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 ST18O60284 1047 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 C8AP07357 584 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 CFHP08603 1231 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 HNRNPA1P09651 372 aaKnown RBP eCLIP27.1■■□□□ 1.93
HERC4-212ENST00000505760 AOC1P19801 751 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 CLCNKBP51801 687 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 ZRSR1Q15695 479 aaKnown RBP27.1■■□□□ 1.93
HERC4-212ENST00000505760 IL17AQ16552 155 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 ZNF568Q3ZCX4 644 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 DCLRE1AQ6PJP8 1040 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 DAW1Q8N136 415 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 SLC44A3Q8N4M1 653 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 UROC1Q96N76 676 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 RUSC1Q9BVN2 902 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 TMEM134Q9H6X4 195 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.1■■□□□ 1.93
HERC4-212ENST00000505760 WNT16Q9UBV4 365 aa27.1■■□□□ 1.93
HERC4-212ENST00000505760 STK25O00506 426 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 ADAM12O43184 909 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 TRAPPC3O43617 180 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 GFRA3O60609 400 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 NPR3P17342 541 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 FSHRP23945 695 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 GRM5P41594 1212 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 OSTNP61366 133 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 RINT1Q6NUQ1 792 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 GRASPQ7Z6J2 395 aaPredicted RBP27.09■■□□□ 1.93
HERC4-212ENST00000505760 CDT1Q9H211 546 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 POLIQ9UNA4 740 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 RBM19Q9Y4C8 960 aaKnown RBP27.09■■□□□ 1.93
HERC4-212ENST00000505760 MYH11P35749 1972 aa27.09■■□□□ 1.93
HERC4-212ENST00000505760 CITO14578 2027 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 SMIM28A0A1B0GU29 152 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 CENPBP07199 599 aaPredicted RBP27.08■■□□□ 1.93
HERC4-212ENST00000505760 SRFP11831 508 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 FGFR3P22607 806 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 RFX1P22670 979 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 OR1D2P34982 312 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 UPP1Q16831 310 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 RILPL1Q5EBL4 403 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 C1orf186Q6ZWK4 172 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 CEP120Q8N960 986 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 RTP3Q9BQQ7 232 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 TCHPQ9BT92 498 aa27.08■■□□□ 1.93
HERC4-212ENST00000505760 MMTAG2Q9BU76 263 aaKnown RBP27.08■■□□□ 1.93
HERC4-212ENST00000505760 TARS2Q9BW92 718 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms