RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 KRT23Q9C075 422 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 GBP3Q9H0R5 595 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 CHRDQ9H2X0 955 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 AGO4Q9HCK5 861 aaKnown RBP7.92□□□□□ -1.14
VCAN-206ENST00000505615 MARCH5Q9NX47 278 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 ZDHHC7Q9NXF8 308 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 DACT1Q9NYF0 836 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 CDH7Q9ULB5 785 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 INPP5FQ9Y2H2 1132 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 ZFP37Q9Y6Q3 630 aaPredicted RBP7.92□□□□□ -1.14
VCAN-206ENST00000505615 NUP205Q92621 2012 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 ATG2BQ96BY7 2078 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 GON4LQ3T8J9 2241 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 CELSR3Q9NYQ7 3312 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 SRRM3A6NNA2 597 aaPredicted RBP7.91□□□□□ -1.14
VCAN-206ENST00000505615 BACH1O14867 736 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 ADAM23O75077 832 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 CSDE1O75534 798 aaKnown RBP7.91□□□□□ -1.14
VCAN-206ENST00000505615 DDHD2O94830 711 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 URODP06132 367 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 SPATA31D3P0C874 917 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 AFF1P51825 1210 aaKnown RBP7.91□□□□□ -1.14
VCAN-206ENST00000505615 PDE1AP54750 535 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 AK2P54819 239 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 PFKPQ01813 784 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 RING1Q06587 406 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 SRSF5Q13243 272 aaKnown RBP7.91□□□□□ -1.14
VCAN-206ENST00000505615 FAM160B1Q5W0V3 765 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 IL31Q6EBC2 164 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 GLB1LQ6UWU2 654 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 AGMOQ6ZNB7 445 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 SPATA31D4Q6ZUB0 917 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 TRIM22Q8IYM9 498 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 LRRC71Q8N4P6 559 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 METTL13Q8N6R0 699 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 EPS8L1Q8TE68 723 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 HDAC7Q8WUI4 952 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 PLEKHA4Q9H4M7 779 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 CNNM2Q9H8M5 875 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 PSTPIP2Q9H939 334 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 ZNF302Q9NR11 478 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 ENAMQ9NRM1 1142 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 RXFP3Q9NSD7 469 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 STK39Q9UEW8 545 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 PCDHA6Q9UN73 950 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 AKT3Q9Y243 479 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 PCDHA8Q9Y5H6 950 aa7.91□□□□□ -1.14
VCAN-206ENST00000505615 UNC79Q9P2D8 2635 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 MYO18BQ8IUG5 2567 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 DDX39AO00148 427 aaKnown RBP7.9□□□□□ -1.14
VCAN-206ENST00000505615 DHX15O43143 795 aaKnown RBP7.9□□□□□ -1.14
VCAN-206ENST00000505615 TGM5O43548 720 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 ZNF623O75123 536 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 KCNK5O95279 499 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 C1RP00736 705 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 PROCP04070 461 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 NRLP54845 237 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 NTHL1P78549 312 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 DSG1Q02413 1049 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 RNASELQ05823 741 aaKnown RBP7.9□□□□□ -1.14
VCAN-206ENST00000505615 ADCY1Q08828 1119 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 SF3A2Q15428 464 aaKnown RBP7.9□□□□□ -1.14
VCAN-206ENST00000505615 XP32Q5T750 250 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 EFCAB12Q6NXP0 572 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 LILRA6Q6PI73 481 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 ELMSAN1Q6PJG2 1045 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 GATA6Q92908 595 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 FGF13Q92913 245 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 PHKBQ93100 1093 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 MAP7D2Q96T17 732 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 NELL2Q99435 816 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 SPOCK3Q9BQ16 436 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 KXD1Q9BQD3 176 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 TMEM175Q9BSA9 504 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 PIDD1Q9HB75 910 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 LY9Q9HBG7 655 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 FAM105AQ9NUU6 356 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 DPP7Q9UHL4 492 aa7.9□□□□□ -1.14
VCAN-206ENST00000505615 MAFBQ9Y5Q3 323 aaPredicted RBP7.9□□□□□ -1.14
VCAN-206ENST00000505615 PI4KAP42356 2102 aa7.9□□□□□ -1.15
VCAN-206ENST00000505615 SPTA1P02549 2419 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 TMEM8BA6NDV4 472 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 SPDYE3A6NKU9 549 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 F8W810 466 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 MEIS1O00470 390 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 NRP1O14786 923 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 MSTNO14793 375 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 NCAM2O15394 837 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 MAGEB2O15479 319 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 FOXD2O60548 495 aaPredicted RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 GLUD2P49448 558 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 RAB15P59190 212 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 SIM2Q14190 667 aaPredicted RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 IMMTQ16891 758 aaKnown RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 AASDHQ4L235 1098 aaPredicted RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 CEP55Q53EZ4 464 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 TWF2Q6IBS0 349 aaKnown RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 SWSAP1Q6NVH7 229 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 MTSS1LQ765P7 747 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms