RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 ZNF687Q8N1G0 1237 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 DDX1Q92499 740 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 FAM3CQ92520 227 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 ELSPBP1Q96BH3 223 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 BRD9Q9H8M2 597 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 SH3GLB2Q9NR46 395 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 ANGPTL2Q9UKU9 493 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 PCDHA4Q9UN74 947 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 WDR81Q562E7 1941 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 MIA3Q5JRA6 1907 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 B4GALT5O43286 388 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 KIF4AO95239 1232 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 RHOP08100 348 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 POU2F2P09086 479 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 CXCL12P48061 93 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 CCR3P51677 355 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 MBTD1Q05BQ5 628 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 POU5F1BQ06416 359 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 TFDP1Q14186 410 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 GRM2Q14416 872 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 KRT32Q14532 448 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 EPHA7Q15375 998 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 SLC5A9Q2M3M2 681 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 PDXDC1Q6P996 788 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 SLC27A1Q6PCB7 646 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 MOXD1Q6UVY6 613 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 TRMT61BQ9BVS5 477 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 VAV3Q9UKW4 847 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 MYH15Q9Y2K3 1946 aa12.84□□□□□ -0.35
CCHCR1-219ENST00000505392 CHD8Q9HCK8 2581 aa12.83□□□□□ -0.35
CCHCR1-219ENST00000505392 A0A1B0GUA9 196 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 SLC37A4O43826 429 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 THP07101 528 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 IFNAR1P17181 557 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 PTPN2P17706 415 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 CCT2P78371 535 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 SATB1Q01826 763 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 ELAVL2Q12926 359 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 SRSF5Q13243 272 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 COL9A2Q14055 689 aaPredicted RBP12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 CTTNQ14247 550 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 INF2Q27J81 1249 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 IL31Q6EBC2 164 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 RTL10Q7L3V2 364 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 BLIDQ8IZY5 108 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 ASAP3Q8TDY4 903 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 LXNQ9BS40 222 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 IER2Q9BTL4 223 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 ZSWIM4Q9H7M6 989 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 XPNPEP1Q9NQW7 623 aa12.83□□□□□ -0.36
CCHCR1-219ENST00000505392 CHD6Q8TD26 2715 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 CHURC1-FNTBB4DL54 471 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 M0R2N6 131 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 MARCH6O60337 910 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 CEBPBP17676 345 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 PMLP29590 882 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 FNTBP49356 437 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 CAPSQ13938 189 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 TPH2Q8IWU9 490 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 IRF7Q92985 503 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 ZNF334Q9HCZ1 680 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 CDY1Q9Y6F8 540 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 PATJQ8NI35 1801 aa12.82□□□□□ -0.36
CCHCR1-219ENST00000505392 NRG2O14511 850 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 PTGESO14684 152 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 FOXD2O60548 495 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 SLITRK3O94933 977 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 CHRNB1P11230 501 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 GLRA2P23416 452 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 FCARP24071 287 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 IGFBP6P24592 240 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 CCNE1P24864 410 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 GDI1P31150 447 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 CNR2P34972 360 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 ARL2P36404 184 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 CYP4A11Q02928 519 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 GAS6Q14393 721 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 FAM78AQ5JUQ0 283 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 CORO1BQ9BR76 489 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 NFKBIZQ9BYH8 718 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 CXCL16Q9H2A7 254 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 NCOA5Q9HCD5 579 aaKnown RBP12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 KCNMB3Q9NPA1 279 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 AVENQ9NQS1 362 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 SNTG2Q9NY99 539 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 MTRRQ9UBK8 725 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 PIAS3Q9Y6X2 628 aa12.81□□□□□ -0.36
CCHCR1-219ENST00000505392 USP24Q9UPU5 2620 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms