RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 ACO2Q99798 780 aaKnown RBP4.11□□□□□ -1.75
RFC1-209ENST00000504974 KLC2Q9H0B6 622 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 SLC12A5Q9H2X9 1139 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 DEF6Q9H4E7 631 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 HDAC5Q9UQL6 1122 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 PCDHB1Q9Y5F3 818 aa4.11□□□□□ -1.75
RFC1-209ENST00000504974 CFAP20Q9Y6A4 193 aaKnown RBP4.11□□□□□ -1.75
RFC1-209ENST00000504974 SMARCA4P51532 1647 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 FSHBP01225 129 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 AMY1AP04745 511 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 ALDH2P05091 517 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 GNAT2P19087 354 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 DDCP20711 480 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 MSX2P35548 267 aaPredicted RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 RPS19P39019 145 aaKnown RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 ALDH1A3P47895 512 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 RAP2BP61225 183 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 CDC42EP1Q00587 391 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 CREMQ03060 361 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 TARDBPQ13148 414 aaKnown RBP eCLIP4.1□□□□□ -1.75
RFC1-209ENST00000504974 FKBP15Q5T1M5 1219 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 CCDC181Q5TID7 509 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 AFMIDQ63HM1 303 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 TCTN3Q6NUS6 607 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 XYLT1Q86Y38 959 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 CCAR1Q8IX12 1150 aaKnown RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 SH2D3CQ8N5H7 860 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 MB21D1Q8N884 522 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 DNERQ8NFT8 737 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 Q8TCH9 128 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 TIFAQ96CG3 184 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 CYFIP2Q96F07 1278 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 C8orf48Q96LL4 319 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 VRK1Q99986 396 aaPredicted RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 SCAND2PQ9GZW5 306 aaPredicted RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 ARMT1Q9H993 441 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 KMT5AQ9NQR1 393 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 PLA2G3Q9NZ20 509 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 MOCS1Q9NZB8 636 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 GABBR1Q9UBS5 961 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 DDX20Q9UHI6 824 aaKnown RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 ZFR2Q9UPR6 939 aaKnown RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 ACTL7AQ9Y615 435 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 PDS5BQ9NTI5 1447 aa4.1□□□□□ -1.75
RFC1-209ENST00000504974 THOC2Q8NI27 1593 aaKnown RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 BAZ1AQ9NRL2 1556 aaPredicted RBP4.1□□□□□ -1.75
RFC1-209ENST00000504974 ERC2O15083 957 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 HOXA3O43365 443 aaPredicted RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 PRC1O43663 620 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 ZNF623O75123 536 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 IL2RBP14784 551 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 SMARCA1P28370 1054 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 PCSK1P29120 753 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 ZNF280AP59817 542 aaPredicted RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 ZXDAP98168 799 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 GRM3Q14832 879 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 LLGL1Q15334 1064 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 ELAVL1Q15717 326 aaKnown RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 KHDC1Q4VXA5 237 aaKnown RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 SPDYAQ5MJ70 313 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 MFSD14BQ5SR56 506 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 THEMIS2Q5TEJ8 643 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 B3GNT9Q6UX72 402 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 DENND1CQ8IV53 801 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 ELOA2Q8IYF1 753 aaPredicted RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 FUKQ8N0W3 1084 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 Q8N1X5 172 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 D2HGDHQ8N465 521 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 PRR18Q8N4B5 295 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 DVL3Q92997 716 aaPredicted RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 C1GALT1C1Q96EU7 318 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 ZNF512Q96ME7 567 aaPredicted RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 CGRRF1Q99675 332 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 CPPED1Q9BRF8 314 aaPredicted RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 NELFAQ9H3P2 528 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 SPON1Q9HCB6 807 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 OBP2AQ9NY56 170 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 CNOT11Q9UKZ1 510 aaKnown RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 MYRFQ9Y2G1 1151 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 PCDHA3Q9Y5H8 950 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 NR2E3Q9Y5X4 410 aa4.09□□□□□ -1.75
RFC1-209ENST00000504974 FRMPD2Q68DX3 1309 aaPredicted RBP4.09□□□□□ -1.75
RFC1-209ENST00000504974 RIMBP3CA6NJZ7 1639 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 RIMBP3BA6NNM3 1639 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 PATE3B3GLJ2 98 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 H3BUI4 141 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 WNT10BO00744 389 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 KIF3BO15066 747 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 KIAA0391O15091 583 aaKnown RBP4.08□□□□□ -1.76
RFC1-209ENST00000504974 SGTAO43765 313 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 AKAP8O43823 692 aaKnown RBP4.08□□□□□ -1.76
RFC1-209ENST00000504974 AMHP03971 560 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 ALOX15P16050 662 aaPredicted RBP4.08□□□□□ -1.76
RFC1-209ENST00000504974 ATP5JP18859 108 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 HK1P19367 917 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 HTR1BP28222 390 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 GUCY1A2P33402 732 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 FLT3LGP49771 235 aa4.08□□□□□ -1.76
RFC1-209ENST00000504974 MAP2K6P52564 334 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms