RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TOMM22Q9NS69 142 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 B4GALT6Q9UBX8 382 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 SPO11Q9Y5K1 396 aa3.05□□□□□ -1.92
HMGB3P17-201ENST00000504195 CBX4O00257 560 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 MOSPD3O75425 235 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 CCKARP32238 428 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 NRG3P56975 720 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 SLC10A2Q12908 348 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 ZNF460Q14592 562 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 CFAP100Q494V2 611 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 SLC9A4Q6AI14 798 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 ESRP1Q6NXG1 681 aaKnown RBP3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 THNSL2Q86YJ6 484 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 VGLL2Q8N8G2 317 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 PMFBP1Q8TBY8 1022 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 DPF1Q92782 380 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 CLUHP3Q96NS8 147 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 POFUT1Q9H488 388 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 ZKSCAN5Q9Y2L8 839 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 PCDHB6Q9Y5E3 794 aa3.04□□□□□ -1.92
HMGB3P17-201ENST00000504195 MYPNQ86TC9 1320 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 ST20-MTHFSA0A0A6YYL1 179 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 DRGXA6NNA5 263 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 PJA2O43164 708 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 DNAJC8O75937 253 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 SEC24DO94855 1032 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 GASTP01350 101 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 JMJD7P0C870 316 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 CD40P25942 277 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 ITPKBP27987 946 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 EXOSC10Q01780 885 aaKnown RBP3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 HYAL1Q12794 435 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 KLF9Q13886 244 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 ZNF626Q68DY1 528 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 CDCA2Q69YH5 1023 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 AWAT2Q6E213 333 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 LMBR1LQ6UX01 489 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 ZDHHC17Q8IUH5 632 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 PASD1Q8IV76 773 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 LILRB2Q8N423 598 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 LNX2Q8N448 690 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 OR56A1Q8NGH5 318 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 RTF1Q92541 710 aaKnown RBP3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 FERMT2Q96AC1 680 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 NRIP3Q9NQ35 241 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 IFT57Q9NWB7 429 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 OXSMQ9NWU1 459 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 KCTD5Q9NXV2 234 aa3.03□□□□□ -1.92
HMGB3P17-201ENST00000504195 KRT86O43790 486 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 GAS7O60861 476 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 PCDH8O95206 1070 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 ELANEP08246 267 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 PRR35P0CG20 571 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 FOLR3P41439 243 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 MEF2AQ02078 507 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 LAMB3Q13751 1172 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 LRRC32Q14392 662 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 KRT81Q14533 505 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 SF3A1Q15459 793 aaKnown RBP3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 NFE2L2Q16236 605 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 C19orf54Q5BKX5 351 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 B3GNTL1Q67FW5 361 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 FCRLBQ6BAA4 426 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 UNQ6494/PRO21346Q6UXR6 183 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 ESPNLQ6ZVH7 1005 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 COLGALT2Q8IYK4 626 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 SEMA6DQ8NFY4 1073 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 DENND1AQ8TEH3 1009 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 OSBPL2Q9H1P3 480 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 BHMT2Q9H2M3 363 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 RNPEPQ9H4A4 650 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 CPNE5Q9HCH3 593 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 ANLNQ9NQW6 1124 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 IL17RBQ9NRM6 502 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 KLHL11Q9NVR0 708 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 PODXL2Q9NZ53 605 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 WNT6Q9Y6F9 365 aa3.02□□□□□ -1.93
HMGB3P17-201ENST00000504195 A0A1W2PR48 441 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 PEX1O43933 1283 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 KELP23276 732 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 CHN2P52757 468 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 CXADRP78310 365 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 GRM1Q13255 1194 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 NBPF8Q3BBV2 869 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 ZNF260Q3ZCT1 412 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 ATXN7L2Q5T6C5 722 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 MORN5Q5VZ52 161 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 TSHZ3Q63HK5 1081 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 CREB3L3Q68CJ9 461 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 ANKS6Q68DC2 871 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 KIF18BQ86Y91 864 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 MSL3Q8N5Y2 521 aaKnown RBP3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 EFHBQ8N7U6 833 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 RNF169Q8NCN4 708 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 RNF31Q96EP0 1072 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 PTCD3Q96EY7 689 aaKnown RBP3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 WBP1Q96G27 269 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 NEU1Q99519 415 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 ZMAT4Q9H898 229 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 MAGEC2Q9UBF1 373 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms