RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ZNF180Q9UJW8 692 aa7.55□□□□□ -1.2
NIPBL-203ENST00000503274 MYBBP1AQ9BQG0 1328 aaKnown RBP7.54□□□□□ -1.2
NIPBL-203ENST00000503274 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 CXorf49A8MYA2 514 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-203ENST00000503274 GOLGA6L6A8MZA4 724 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 GPR32O75388 356 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 AMY1AP04745 511 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 PF4V1P10720 104 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 SCNN1GP51170 649 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 BMT2Q1RMZ1 405 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 C1QL3Q5VWW1 255 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 AFMIDQ63HM1 303 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 PPP4R3AQ6IN85 833 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 RAVER1Q8IY67 606 aaKnown RBP7.54□□□□□ -1.2
NIPBL-203ENST00000503274 ZGPATQ8N5A5 531 aaKnown RBP7.54□□□□□ -1.2
NIPBL-203ENST00000503274 SLC35B2Q8TB61 432 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 JDP2Q8WYK2 163 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 PUS7Q96PZ0 661 aaKnown RBP7.54□□□□□ -1.2
NIPBL-203ENST00000503274 CAMKK2Q96RR4 588 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 GPR20Q99678 358 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 RTFDC1Q9BY42 306 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-203ENST00000503274 RHOBTB2Q9BYZ6 727 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 CPEB1Q9BZB8 566 aaKnown RBP7.54□□□□□ -1.2
NIPBL-203ENST00000503274 CDH19Q9H159 772 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 SPON1Q9HCB6 807 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 TDP1Q9NUW8 608 aa7.54□□□□□ -1.2
NIPBL-203ENST00000503274 TOPBP1Q92547 1522 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 KLRG2A4D1S0 409 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 PJA2O43164 708 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 TEX33O43247 280 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 SGTAO43765 313 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 RPLP2P05387 115 aaKnown RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 SNRPA1P09661 255 aaKnown RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 RAP2AP10114 183 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 DDCP20711 480 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 FPR1P21462 350 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 AKAP5P24588 427 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 PCSK1P29120 753 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 CLRN1P58418 232 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 CDC42EP1Q00587 391 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 CNGB1Q14028 1251 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 RRP1BQ14684 758 aaKnown RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 VPS72Q15906 364 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 RRP12Q5JTH9 1297 aaKnown RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 SPDYAQ5MJ70 313 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 NAIF1Q69YI7 327 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 HTR3DQ70Z44 454 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 RSPH3Q86UC2 560 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 JPH3Q8WXH2 748 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 PGBD4Q96DM1 585 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 AURKAIP1Q9NWT8 199 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 ZIM2Q9NZV7 527 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-203ENST00000503274 ACTL7AQ9Y615 435 aa7.53□□□□□ -1.2
NIPBL-203ENST00000503274 XDHP47989 1333 aa7.52□□□□□ -1.2
NIPBL-203ENST00000503274 C1QTNF3-AMACRE9PGA6 284 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 POU2F2P09086 479 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 PDCP20941 246 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 ALDH1A3P47895 512 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 ATP8B2P98198 1209 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 TARDBPQ13148 414 aaKnown RBP eCLIP7.52□□□□□ -1.21
NIPBL-203ENST00000503274 MTM1Q13496 603 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 OTUD7BQ6GQQ9 843 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 EFCAB12Q6NXP0 572 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 DRICH1Q6PGQ1 229 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-203ENST00000503274 ZFP28Q8NHY6 868 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 TFAP2CQ92754 450 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 KAT5Q92993 513 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 MRI1Q9BV20 369 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 PNMA8BQ9ULN7 279 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-203ENST00000503274 G3BP2Q9UN86 482 aaKnown RBP7.52□□□□□ -1.21
NIPBL-203ENST00000503274 PCDHB1Q9Y5F3 818 aa7.52□□□□□ -1.21
NIPBL-203ENST00000503274 CFAP20Q9Y6A4 193 aaKnown RBP7.52□□□□□ -1.21
NIPBL-203ENST00000503274 PLSCR1O15162 318 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 DTNBO60941 627 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 ATP5JP18859 108 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 CSRP2Q16527 193 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 USP39Q53GS9 565 aaKnown RBP7.51□□□□□ -1.21
NIPBL-203ENST00000503274 USP45Q70EL2 814 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 TTC7BQ86TV6 843 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 TMPRSS6Q8IU80 811 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 EXTL1Q92935 676 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 RAB24Q969Q5 203 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 TMX3Q96JJ7 454 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 EID1Q9Y6B2 187 aa7.51□□□□□ -1.21
NIPBL-203ENST00000503274 DNMBPQ6XZF7 1577 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 RFPL1O75677 317 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 MGAT1P26572 445 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 CTXN1P60606 82 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 NFE2Q16621 373 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-203ENST00000503274 NRN1LQ496H8 165 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 ATXN7L2Q5T6C5 722 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-203ENST00000503274 C1orf210Q8IVY1 113 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 DRC7Q8IY82 874 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 PRR18Q8N4B5 295 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 IL17DQ8TAD2 202 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 SH3RF3Q8TEJ3 882 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-203ENST00000503274 CLPTM1LQ96KA5 538 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 POGKQ9P215 609 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms