RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 ATP13A1Q9HD20 1204 aa6.94□□□□□ -1.3
CLCN3-203ENST00000502998 HAUS2Q9NVX0 235 aa6.94□□□□□ -1.3
CLCN3-203ENST00000502998 TNFRSF10DQ9UBN6 386 aa6.94□□□□□ -1.3
CLCN3-203ENST00000502998 DBF4Q9UBU7 674 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-203ENST00000502998 ASIC3Q9UHC3 531 aa6.94□□□□□ -1.3
CLCN3-203ENST00000502998 DUSP12Q9UNI6 340 aa6.94□□□□□ -1.3
CLCN3-203ENST00000502998 NSFL1CQ9UNZ2 370 aaKnown RBP6.94□□□□□ -1.3
CLCN3-203ENST00000502998 DNAJC16Q9Y2G8 782 aa6.94□□□□□ -1.3
CLCN3-203ENST00000502998 PDS5AQ29RF7 1337 aaKnown RBP6.94□□□□□ -1.3
CLCN3-203ENST00000502998 COL15A1P39059 1388 aa6.94□□□□□ -1.3
CLCN3-203ENST00000502998 SIPA1L3O60292 1781 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ARFGEF1Q9Y6D6 1849 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ANO9A1A5B4 782 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 USP27XA6NNY8 438 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ST8SIA5O15466 376 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 N4BP1O75113 896 aaKnown RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ZPR1O75312 459 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 PDE5AO76074 875 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 SNX4O95219 450 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 POP4O95707 220 aaKnown RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 DDX58O95786 925 aaKnown RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 SYF2O95926 243 aaKnown RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 NPPAP01160 153 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 RETP07949 1114 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ABCB1P08183 1280 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 PYGMP11217 842 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CHRNA5P30532 468 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 IFNA8P32881 189 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 HSPA13P48723 471 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ARHGDIBP52566 201 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 MLLT6P55198 1093 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 VBP1P61758 197 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 UBE2HP62256 183 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 KRT76Q01546 638 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 PRKCEQ02156 737 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 RELAQ04206 551 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 SMARCB1Q12824 385 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ZNF268Q14587 947 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CNGA2Q16280 664 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CTC1Q2NKJ3 1217 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ZNF792Q3KQV3 632 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CFAP221Q4G0U5 840 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ANKRD20A8PQ5CZ79 823 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ANKRD20A2Q5SQ80 823 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ANKRD20A1Q5TYW2 823 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ANKRD20A3Q5VUR7 823 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 DMRTA1Q5VZB9 504 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 TMEM154Q6P9G4 183 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 KDELC1Q6UW63 502 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ARHGAP36Q6ZRI8 547 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ANO5Q75V66 913 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 FAM124AQ86V42 546 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 PALB2Q86YC2 1186 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 RNF135Q8IUD6 432 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CLVS1Q8IUQ0 354 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 RTKN2Q8IZC4 609 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 TTC5Q8N0Z6 440 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 LRRN4CLQ8ND94 238 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 EHBP1Q8NDI1 1231 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 IL17REQ8NFR9 667 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 PJA1Q8NG27 643 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CALML6Q8TD86 181 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 RUFY2Q8WXA3 655 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 HSPH1Q92598 858 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CCDC127Q96BQ5 260 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 PHACTR3Q96KR7 559 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 MNTQ99583 582 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CENPKQ9BS16 269 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 MXD3Q9BW11 206 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CDH19Q9H159 772 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 EPN3Q9H201 632 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 SNX25Q9H3E2 840 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 RAD21L1Q9H4I0 556 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 HAUS4Q9H6D7 363 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CAAP1Q9H8G2 361 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 UCK1Q9HA47 277 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ENAMQ9NRM1 1142 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 ARHGEF38Q9NXL2 777 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 SAMD15Q9P1V8 674 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 CNTN3Q9P232 1028 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 NARFQ9UHQ1 456 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 GTF2A1LQ9UNN4 478 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 HBS1LQ9Y450 684 aaKnown RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 TLL2Q9Y6L7 1015 aa6.93□□□□□ -1.3
CLCN3-203ENST00000502998 MYBBP1AQ9BQG0 1328 aaKnown RBP6.93□□□□□ -1.3
CLCN3-203ENST00000502998 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 POTECB2RU33 542 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 B8ZZF3 427 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 STX16-NPEPL1H3BU86 382 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 INO80B-WBP1J3KQ70 363 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 E2F3O00716 465 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 KPNA5O15131 536 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 NCK2O43639 380 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 STX6O43752 255 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 ATP9AO75110 1047 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 ARHGEF15O94989 841 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 KLHL2O95198 593 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 HMGN1P05114 100 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 IFIT2P09913 472 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 HPGDP15428 266 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms