RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 PUM1Q14671 1186 aaKnown RBP eCLIP16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 MLF2Q15773 248 aaPredicted RBP16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 LIN9Q5TKA1 542 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 DDX23Q9BUQ8 820 aaKnown RBP16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 HCFC1R1Q9NWW0 138 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 SNTG2Q9NY99 539 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 TICRRQ7Z2Z1 1910 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 WNT7AO00755 349 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 USO1O60763 962 aaKnown RBP16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 KINO60870 393 aaKnown RBP16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 CTDNEP1O95476 244 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 IGFBP6P24592 240 aaPredicted RBP16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 UBXN2BQ14CS0 331 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 NAB2Q15742 525 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 AXDND1Q5T1B0 1012 aaPredicted RBP16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 MTSS1LQ765P7 747 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 TNFRSF25Q93038 417 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 CCDC43Q96MW1 224 aaKnown RBP16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 KXD1Q9BQD3 176 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 TTC12Q9H892 705 aaPredicted RBP16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 SPATA6Q9NWH7 488 aaPredicted RBP16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 DLL3Q9NYJ7 618 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 USP20Q9Y2K6 914 aa16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 PDCD11Q14690 1871 aaKnown RBP16.22■□□□□ 0.19
SEC61A1-207ENST00000498837 EPG5Q9HCE0 2579 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 FAM170BA6NMN3 283 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 LAMTOR5O43504 91 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 THP07101 528 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 HOXA9P31269 272 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 TXKP42681 527 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 PRKCQQ04759 706 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 CALCRLQ16602 461 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 NOSTRINQ8IVI9 506 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 SLC7A14Q8TBB6 771 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 BCO2Q9BYV7 579 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 FZD8Q9H461 694 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 PDZD7Q9H5P4 517 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 PRMT7Q9NVM4 692 aaPredicted RBP16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 DNMT3BQ9UBC3 853 aaKnown RBP16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 ORC3Q9UBD5 711 aaPredicted RBP16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 TPCN1Q9ULQ1 816 aa16.21■□□□□ 0.19
SEC61A1-207ENST00000498837 EPB41L2O43491 1005 aaKnown RBP16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 PFKFB2O60825 505 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 XYLBO75191 536 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 RECQL4O94761 1208 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 OR1D2P34982 312 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 KRT2P35908 639 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 CSTF1Q05048 431 aaKnown RBP16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 RSPO4Q2I0M5 234 aaPredicted RBP16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 ZNF528Q3MIS6 628 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 RSPO2Q6UXX9 243 aaPredicted RBP16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 ING5Q8WYH8 240 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 LTB4R2Q9NPC1 389 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 FBXO4Q9UKT5 387 aa16.2■□□□□ 0.18
SEC61A1-207ENST00000498837 MYH11P35749 1972 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 N4BP3O15049 544 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 EDN1P05305 212 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 SPATA31C1P0DKV0 1188 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 XRCC6P12956 609 aaKnown RBP eCLIP16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 FDPSP14324 419 aaKnown RBP16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 RAB33AQ14088 237 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 FAM187BQ17R55 369 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 PABPC1LQ4VXU2 614 aaKnown RBP16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 VARS2Q5ST30 1063 aaKnown RBP16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 CDCA2Q69YH5 1023 aaPredicted RBP16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 POTEHQ6S545 545 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 NPAS3Q8IXF0 933 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 BSNDQ8WZ55 320 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 OSBPL6Q9BZF3 934 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 PLA2G2FQ9BZM2 168 aa16.19■□□□□ 0.18
SEC61A1-207ENST00000498837 ACACBO00763 2458 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 LIG1P18858 919 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 FGFR3P22607 806 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 PFKPQ01813 784 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 ELAVL2Q12926 359 aaKnown RBP16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 TMEM132AQ24JP5 1023 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 UVSSAQ2YD98 709 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 ZBTB41Q5SVQ8 909 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 PDXDC1Q6P996 788 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 ZBTB8OSQ8IWT0 167 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 MCRS1Q96EZ8 462 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 MTMR9Q96QG7 549 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 NCDNQ9UBB6 729 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 GDAQ9Y2T3 454 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 COL4A2P08572 1712 aa16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 KMT2BQ9UMN6 2715 aaPredicted RBP16.18■□□□□ 0.18
SEC61A1-207ENST00000498837 BTBD18B2RXH4 712 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 SPTLC1O15269 473 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 NEMFO60524 1076 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 PRKCBP05771 671 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 POU2F2P09086 479 aa16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 TARSP26639 723 aaKnown RBP16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 PRPF4BQ13523 1007 aaKnown RBP16.17■□□□□ 0.18
SEC61A1-207ENST00000498837 SLC5A9Q2M3M2 681 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms