RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 PRSS55Q6UWB4 352 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-227ENST00000498548 CEP57Q86XR8 500 aa17.67■□□□□ 0.42
NR1H3-227ENST00000498548 RAD54LQ92698 747 aa17.67■□□□□ 0.42
NR1H3-227ENST00000498548 REEP2Q9BRK0 252 aa17.67■□□□□ 0.42
NR1H3-227ENST00000498548 CCDC94Q9BW85 323 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-227ENST00000498548 ZHX3Q9H4I2 956 aa17.67■□□□□ 0.42
NR1H3-227ENST00000498548 RXFP1Q9HBX9 757 aa17.67■□□□□ 0.42
NR1H3-227ENST00000498548 FBXO2Q9UK22 296 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-227ENST00000498548 C2orf16Q68DN1 1984 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 CITO14578 2027 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 SLC26A4O43511 780 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 STX6O43752 255 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 PROZP22891 400 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 HERC4Q5GLZ8 1057 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-227ENST00000498548 RTP2Q5QGT7 225 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 ATAT1Q5SQI0 421 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 FOXD4L5Q5VV16 416 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-227ENST00000498548 MPZL3Q6UWV2 235 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 APBB1IPQ7Z5R6 666 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-227ENST00000498548 MYCT1Q8N699 235 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 FOXD4L4Q8WXT5 416 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-227ENST00000498548 RIPOR3Q96MK2 946 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 PPP1R10Q96QC0 940 aaKnown RBP17.66■□□□□ 0.42
NR1H3-227ENST00000498548 USP28Q96RU2 1077 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 MAN1C1Q9NR34 630 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 ANKFY1Q9P2R3 1169 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 MYO10Q9HD67 2058 aa17.66■□□□□ 0.42
NR1H3-227ENST00000498548 MTCL1Q9Y4B5 1905 aaKnown RBP17.66■□□□□ 0.42
NR1H3-227ENST00000498548 VWA8A3KMH1 1905 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 SMIM28A0A1B0GU29 152 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 C2CD4DB7Z1M9 353 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 MEFVO15553 781 aaPredicted RBP17.65■□□□□ 0.42
NR1H3-227ENST00000498548 FAM13AO94988 1023 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 KRT18P05783 430 aaKnown RBP17.65■□□□□ 0.42
NR1H3-227ENST00000498548 ADH1AP07327 375 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 MCF2P10911 925 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 MTHFRP42898 656 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 MATR3P43243 847 aaKnown RBP eCLIP17.65■□□□□ 0.42
NR1H3-227ENST00000498548 CLCNKBP51801 687 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 YARSP54577 528 aaKnown RBP17.65■□□□□ 0.42
NR1H3-227ENST00000498548 NCKAP1LP55160 1127 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 SOX4Q06945 474 aaPredicted RBP17.65■□□□□ 0.42
NR1H3-227ENST00000498548 ALKAL1Q6UXT8 129 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 HAUS6Q7Z4H7 955 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 TMEM130Q8N3G9 435 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 ZMAT2Q96NC0 199 aaKnown RBP17.65■□□□□ 0.42
NR1H3-227ENST00000498548 ACAP3Q96P50 834 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 CCSER1Q9C0I3 900 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 HAPLN2Q9GZV7 340 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 SFXN1Q9H9B4 322 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 KCND2Q9NZV8 630 aa17.65■□□□□ 0.42
NR1H3-227ENST00000498548 LARSQ9P2J5 1176 aaKnown RBP17.65■□□□□ 0.42
NR1H3-227ENST00000498548 SRPRBQ9Y5M8 271 aaKnown RBP17.65■□□□□ 0.42
NR1H3-227ENST00000498548 GLUD1P00367 558 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 DDIT3P35638 169 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 CD300LGQ6UXG3 332 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 GPR149Q86SP6 731 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 SPRYD3Q8NCJ5 442 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 LARP4BQ92615 738 aaKnown RBP17.64■□□□□ 0.41
NR1H3-227ENST00000498548 SNX21Q969T3 373 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 BICD1Q96G01 975 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 NECTIN4Q96NY8 510 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 PANK2Q9BZ23 570 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 KCNG1Q9UIX4 513 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 ODF2LQ9ULJ1 636 aa17.64■□□□□ 0.41
NR1H3-227ENST00000498548 SF3B1O75533 1304 aaKnown RBP eCLIP17.64■□□□□ 0.41
NR1H3-227ENST00000498548 CCDC195A0A1B0GUA6 201 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 I3L4J1 428 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 K7ENM7 598 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 TGM5O43548 720 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 RFPL2O75678 378 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 B3GAT3O94766 335 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 NMT1P30419 496 aaKnown RBP17.63■□□□□ 0.41
NR1H3-227ENST00000498548 BRCC3P46736 316 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 XKR4Q5GH76 650 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 DCLRE1AQ6PJP8 1040 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 DYMQ7RTS9 669 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 C3orf58Q8NDZ4 430 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 LNX1Q8TBB1 728 aaPredicted RBP17.63■□□□□ 0.41
NR1H3-227ENST00000498548 EDAQ92838 391 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 C18orf25Q96B23 403 aaPredicted RBP17.63■□□□□ 0.41
NR1H3-227ENST00000498548 SNX27Q96L92 541 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 TTPALQ9BTX7 342 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 TFIP11Q9UBB9 837 aaKnown RBP17.63■□□□□ 0.41
NR1H3-227ENST00000498548 NR2E1Q9Y466 385 aa17.63■□□□□ 0.41
NR1H3-227ENST00000498548 MYH15Q9Y2K3 1946 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 PRR33A8MZF0 331 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 ADAM12O43184 909 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 TRAK2O60296 914 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 TOM1L1O75674 476 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 BRD1O95696 1058 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 ZXDAP98168 799 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 SPAG1Q07617 926 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 NOLC1Q14978 699 aaKnown RBP eCLIP17.62■□□□□ 0.41
NR1H3-227ENST00000498548 UPP1Q16831 310 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 SLC10A6Q3KNW5 377 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 CLSTN3Q9BQT9 956 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 ZSCAN16Q9H4T2 348 aaPredicted RBP17.62■□□□□ 0.41
NR1H3-227ENST00000498548 PARVGQ9HBI0 331 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms