RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SLC7A14Q8TBB6 771 aa16.28■□□□□ 0.2
TRAF4-212ENST00000498540 CCDC43Q96MW1 224 aaKnown RBP16.28■□□□□ 0.2
TRAF4-212ENST00000498540 TM6SF1Q9BZW5 370 aa16.28■□□□□ 0.2
TRAF4-212ENST00000498540 PDRG1Q9NUG6 133 aa16.28■□□□□ 0.2
TRAF4-212ENST00000498540 HCFC1R1Q9NWW0 138 aa16.28■□□□□ 0.2
TRAF4-212ENST00000498540 WNT7AO00755 349 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 RECQL4O94761 1208 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 CD72P21854 359 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 NAB2Q15742 525 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 SLC44A4Q53GD3 710 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 MAEAQ7L5Y9 396 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 TNFRSF25Q93038 417 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 PDZD7Q9H5P4 517 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 TTC12Q9H892 705 aaPredicted RBP16.27■□□□□ 0.2
TRAF4-212ENST00000498540 SNTG2Q9NY99 539 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 PCDHA12Q9UN75 941 aa16.27■□□□□ 0.2
TRAF4-212ENST00000498540 FAM170BA6NMN3 283 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 LAMTOR5O43504 91 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 XYLBO75191 536 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 CTDNEP1O95476 244 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 THP07101 528 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 IGFBP6P24592 240 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-212ENST00000498540 PRKCQQ04759 706 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 CALCRLQ16602 461 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 RSPO4Q2I0M5 234 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-212ENST00000498540 ZNF528Q3MIS6 628 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 AXDND1Q5T1B0 1012 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-212ENST00000498540 CDCA2Q69YH5 1023 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-212ENST00000498540 NPAS3Q8IXF0 933 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 ING5Q8WYH8 240 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 PRIMPOLQ96LW4 560 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 LTB4R2Q9NPC1 389 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 PRMT7Q9NVM4 692 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-212ENST00000498540 FBXO4Q9UKT5 387 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 USP20Q9Y2K6 914 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 TRIP11Q15643 1979 aa16.26■□□□□ 0.19
TRAF4-212ENST00000498540 SPTLC1O15269 473 aa16.25■□□□□ 0.19
TRAF4-212ENST00000498540 EDN1P05305 212 aa16.25■□□□□ 0.19
TRAF4-212ENST00000498540 OR1D2P34982 312 aa16.25■□□□□ 0.19
TRAF4-212ENST00000498540 KRT2P35908 639 aa16.25■□□□□ 0.19
TRAF4-212ENST00000498540 CSTF1Q05048 431 aaKnown RBP16.25■□□□□ 0.19
TRAF4-212ENST00000498540 FAM187BQ17R55 369 aa16.25■□□□□ 0.19
TRAF4-212ENST00000498540 PABPC1LQ4VXU2 614 aaKnown RBP16.25■□□□□ 0.19
TRAF4-212ENST00000498540 VARS2Q5ST30 1063 aaKnown RBP16.25■□□□□ 0.19
TRAF4-212ENST00000498540 FZD8Q9H461 694 aa16.25■□□□□ 0.19
TRAF4-212ENST00000498540 NCDNQ9UBB6 729 aa16.25■□□□□ 0.19
TRAF4-212ENST00000498540 DNMT3BQ9UBC3 853 aaKnown RBP16.25■□□□□ 0.19
TRAF4-212ENST00000498540 ORC3Q9UBD5 711 aaPredicted RBP16.25■□□□□ 0.19
TRAF4-212ENST00000498540 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
TRAF4-212ENST00000498540 N4BP3O15049 544 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
TRAF4-212ENST00000498540 PFKFB2O60825 505 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 POU2F2P09086 479 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 TARSP26639 723 aaKnown RBP16.24■□□□□ 0.19
TRAF4-212ENST00000498540 TXKP42681 527 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 PFKPQ01813 784 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 ELAVL2Q12926 359 aaKnown RBP16.24■□□□□ 0.19
TRAF4-212ENST00000498540 RAB33AQ14088 237 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 RSPO2Q6UXX9 243 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-212ENST00000498540 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-212ENST00000498540 TPRG1Q6ZUI0 275 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 NOSTRINQ8IVI9 506 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 ZBTB8OSQ8IWT0 167 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 BSNDQ8WZ55 320 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 OSBPL6Q9BZF3 934 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 MTRRQ9UBK8 725 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 PCDHGA2Q9Y5H1 932 aa16.24■□□□□ 0.19
TRAF4-212ENST00000498540 NEMFO60524 1076 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 SPATA31C1P0DKV0 1188 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 FDPSP14324 419 aaKnown RBP16.23■□□□□ 0.19
TRAF4-212ENST00000498540 FGFR3P22607 806 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 PRPF4BQ13523 1007 aaKnown RBP16.23■□□□□ 0.19
TRAF4-212ENST00000498540 TMEM132AQ24JP5 1023 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 SLC5A9Q2M3M2 681 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 GLRA4Q5JXX5 417 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 EEF1DP3Q658K8 133 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 PDXDC1Q6P996 788 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 POTEHQ6S545 545 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 ZBTB44Q8NCP5 570 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 MCPH1Q8NEM0 835 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 MTMR9Q96QG7 549 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 PLA2G2FQ9BZM2 168 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 KCNH3Q9ULD8 1083 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 GDAQ9Y2T3 454 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 CDY1Q9Y6F8 540 aa16.23■□□□□ 0.19
TRAF4-212ENST00000498540 SHISA7A6NL88 538 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 PRKCBP05771 671 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 XRCC6P12956 609 aaKnown RBP eCLIP16.22■□□□□ 0.193e-10■■□□□ 12.6
TRAF4-212ENST00000498540 LIG1P18858 919 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 ATP2B1P20020 1258 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 MAGEA9P43362 315 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 UVSSAQ2YD98 709 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 ZBTB41Q5SVQ8 909 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 TSSK4Q6SA08 328 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 CD300LGQ6UXG3 332 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 ATRIPQ8WXE1 791 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 CLDN23Q96B33 292 aa16.22■□□□□ 0.19
TRAF4-212ENST00000498540 MCRS1Q96EZ8 462 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms