RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
PBX1-211ENST00000498497 CCDC22O60826 627 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 CHKAP35790 457 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 PTK2Q05397 1052 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 STRN3Q13033 797 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 CCDC62Q6P9F0 684 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 XKR5Q6UX68 686 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 ZDHHC24Q6UX98 284 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 ARHGEF18Q6ZSZ5 1173 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
PBX1-211ENST00000498497 PPP2R3CQ969Q6 453 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 NACAP1Q9BZK3 213 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 KLHL25Q9H0H3 589 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 LY9Q9HBG7 655 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 CARD8Q9Y2G2 431 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 RIMS1Q86UR5 1692 aaKnown RBP12.35□□□□□ -0.43
PBX1-211ENST00000498497 A0A087WZG4 1122 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 FUOMA2VDF0 154 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 FUCA1P04066 466 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 VCLP18206 1134 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 PHBP35232 272 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 KRT2P35908 639 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 EIF4A1P60842 406 aaKnown RBP12.35□□□□□ -0.43
PBX1-211ENST00000498497 TGFBIQ15582 683 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 INAQ16352 499 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 FBXL19Q6PCT2 694 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 SYT2Q8N9I0 419 aaPredicted RBP12.35□□□□□ -0.43
PBX1-211ENST00000498497 HELQQ8TDG4 1101 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 BAP1Q92560 729 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 INPP5DQ92835 1189 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 MXD3Q9BW11 206 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 GBA3Q9H227 469 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 OLFML3Q9NRN5 406 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 ZDHHC18Q9NUE0 388 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 TMEM59LQ9UK28 342 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 FRMD4BQ9Y2L6 1034 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 ANKARQ7Z5J8 1434 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 ARHGEF10O15013 1369 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 MYPNQ86TC9 1320 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 ZBED1O96006 694 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 MARCKSL1P49006 195 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 DDHD1Q8NEL9 900 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 RBM15Q96T37 977 aaKnown RBP eCLIP12.35□□□□□ -0.43
PBX1-211ENST00000498497 GPATCH1Q9BRR8 931 aaKnown RBP12.35□□□□□ -0.43
PBX1-211ENST00000498497 ZBED2Q9BTP6 218 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 FOXP1Q9H334 677 aaPredicted RBP12.35□□□□□ -0.43
PBX1-211ENST00000498497 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 FADS3Q9Y5Q0 445 aa12.35□□□□□ -0.43
PBX1-211ENST00000498497 TCRBV7S2A1N4TA0A589 114 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 TBC1D12O60347 775 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 CIB2O75838 187 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 DGKIO75912 1065 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 DDX58O95786 925 aaKnown RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 VCPP55072 806 aaKnown RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 GSTA3Q16772 222 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 ANO4Q32M45 955 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 EDRF1Q3B7T1 1238 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 LRRC6Q86X45 466 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 CAPSLQ8WWF8 208 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 HPS1Q92902 700 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 HNRNPABQ99729 332 aaKnown RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 SIK3Q9Y2K2 1263 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 ATP5HO75947 161 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 RPL10P27635 214 aaKnown RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 SKIV2L2P42285 1042 aaKnown RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 ASIC2Q16515 512 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 DAB2IPQ5VWQ8 1189 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 ALKBH5Q6P6C2 394 aaKnown RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 POU2F3Q9UKI9 436 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
PBX1-211ENST00000498497 PITPNM2Q9BZ72 1349 aa12.34□□□□□ -0.43
PBX1-211ENST00000498497 TRAF5O00463 557 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 MYCP01106 439 aaPredicted RBP12.33□□□□□ -0.44
PBX1-211ENST00000498497 TFAP2AP05549 437 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 NUDT17P0C025 328 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 KCNA2P16389 499 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 TATP17735 454 aaPredicted RBP12.33□□□□□ -0.44
PBX1-211ENST00000498497 SLC18A3Q16572 532 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 PPP6R3Q5H9R7 873 aaPredicted RBP12.33□□□□□ -0.44
PBX1-211ENST00000498497 GJB7Q6PEY0 223 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 PPP1R21Q6ZMI0 780 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 SNX29P2Q8IUI4 249 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 ANKMY2Q8IV38 441 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 ZBED8Q8IZ13 594 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 WASF1Q92558 559 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 SH3GL1Q99961 368 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 UBA5Q9GZZ9 404 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 EHD1Q9H4M9 534 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 PLEKHA5Q9HAU0 1116 aa12.33□□□□□ -0.44
PBX1-211ENST00000498497 ZNF287Q9HBT7 754 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms