RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 TTC12Q9H892 705 aaPredicted RBP17.79■□□□□ 0.44
MUC1-220ENST00000498431 HCFC1R1Q9NWW0 138 aa17.79■□□□□ 0.44
MUC1-220ENST00000498431 SNTG2Q9NY99 539 aa17.79■□□□□ 0.44
MUC1-220ENST00000498431 POLIQ9UNA4 740 aa17.79■□□□□ 0.44
MUC1-220ENST00000498431 ZFP37Q9Y6Q3 630 aaPredicted RBP17.79■□□□□ 0.44
MUC1-220ENST00000498431 EPB41L2O43491 1005 aaKnown RBP17.78■□□□□ 0.44
MUC1-220ENST00000498431 PFKFB2O60825 505 aa17.78■□□□□ 0.44
MUC1-220ENST00000498431 EDN1P05305 212 aa17.78■□□□□ 0.44
MUC1-220ENST00000498431 HNRNPA1P09651 372 aaKnown RBP eCLIP17.78■□□□□ 0.44
MUC1-220ENST00000498431 FDPSP14324 419 aaKnown RBP17.78■□□□□ 0.44
MUC1-220ENST00000498431 LIN9Q5TKA1 542 aa17.78■□□□□ 0.44
MUC1-220ENST00000498431 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
MUC1-220ENST00000498431 RUBCNQ92622 972 aa17.78■□□□□ 0.44
MUC1-220ENST00000498431 KXD1Q9BQD3 176 aa17.78■□□□□ 0.44
MUC1-220ENST00000498431 PDZD7Q9H5P4 517 aa17.78■□□□□ 0.44
MUC1-220ENST00000498431 PPP4R2Q9NY27 417 aa17.78■□□□□ 0.44
MUC1-220ENST00000498431 ORC3Q9UBD5 711 aaPredicted RBP17.78■□□□□ 0.44
MUC1-220ENST00000498431 KANSL1LA0AUZ9 987 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 RECQL4O94761 1208 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 CD72P21854 359 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 KRT2P35908 639 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 TXKP42681 527 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 MLF2Q15773 248 aaPredicted RBP17.77■□□□□ 0.44
MUC1-220ENST00000498431 CDCA2Q69YH5 1023 aaPredicted RBP17.77■□□□□ 0.44
MUC1-220ENST00000498431 NOSTRINQ8IVI9 506 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 SLC7A14Q8TBB6 771 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 BSNDQ8WZ55 320 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 SHDQ96IW2 340 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 FZD8Q9H461 694 aa17.77■□□□□ 0.44
MUC1-220ENST00000498431 PRMT7Q9NVM4 692 aaPredicted RBP17.77■□□□□ 0.44
MUC1-220ENST00000498431 THP07101 528 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 SPATA31C1P0DKV0 1188 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 HOXA9P31269 272 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 UBXN2BQ14CS0 331 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 SLC44A4Q53GD3 710 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 AXDND1Q5T1B0 1012 aaPredicted RBP17.76■□□□□ 0.43
MUC1-220ENST00000498431 POTEHQ6S545 545 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 RSPO2Q6UXX9 243 aaPredicted RBP17.76■□□□□ 0.43
MUC1-220ENST00000498431 MTSS1LQ765P7 747 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 NPAS3Q8IXF0 933 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 ING5Q8WYH8 240 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 PRIMPOLQ96LW4 560 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 MTMR9Q96QG7 549 aa17.76■□□□□ 0.43
MUC1-220ENST00000498431 SPATA6Q9NWH7 488 aaPredicted RBP17.76■□□□□ 0.43
MUC1-220ENST00000498431 DNMT3BQ9UBC3 853 aaKnown RBP17.76■□□□□ 0.43
MUC1-220ENST00000498431 NEMFO60524 1076 aa17.75■□□□□ 0.43
MUC1-220ENST00000498431 XYLBO75191 536 aa17.75■□□□□ 0.43
MUC1-220ENST00000498431 OR1D2P34982 312 aa17.75■□□□□ 0.43
MUC1-220ENST00000498431 FOSBP53539 338 aa17.75■□□□□ 0.43
MUC1-220ENST00000498431 PUM1Q14671 1186 aaKnown RBP eCLIP17.75■□□□□ 0.43
MUC1-220ENST00000498431 FAM187BQ17R55 369 aa17.75■□□□□ 0.43
MUC1-220ENST00000498431 EEF1DP3Q658K8 133 aa17.75■□□□□ 0.43
MUC1-220ENST00000498431 TMEM60Q9H2L4 133 aa17.75■□□□□ 0.43
MUC1-220ENST00000498431 DLL3Q9NYJ7 618 aa17.75■□□□□ 0.43
MUC1-220ENST00000498431 FAM170BA6NMN3 283 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 BTBD18B2RXH4 712 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 N4BP3O15049 544 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 KINO60870 393 aaKnown RBP17.74■□□□□ 0.43
MUC1-220ENST00000498431 PRKCQQ04759 706 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 RAB33AQ14088 237 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 ZBTB8OSQ8IWT0 167 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 BCO2Q9BYV7 579 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 CCDC113Q9H0I3 377 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 LTB4R2Q9NPC1 389 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 GDAQ9Y2T3 454 aa17.74■□□□□ 0.43
MUC1-220ENST00000498431 TRIP11Q15643 1979 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 LAMTOR5O43504 91 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 MED24O75448 989 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 LARGE1O95461 756 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 PRKCBP05771 671 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 POU2F2P09086 479 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 XRCC6P12956 609 aaKnown RBP eCLIP17.73■□□□□ 0.43
MUC1-220ENST00000498431 LIG1P18858 919 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 ATP2B1P20020 1258 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 FGFR3P22607 806 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 CSTF1Q05048 431 aaKnown RBP17.73■□□□□ 0.43
MUC1-220ENST00000498431 ELAVL2Q12926 359 aaKnown RBP17.73■□□□□ 0.43
MUC1-220ENST00000498431 PRPF4BQ13523 1007 aaKnown RBP17.73■□□□□ 0.43
MUC1-220ENST00000498431 TMEM132AQ24JP5 1023 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 SLC5A9Q2M3M2 681 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 ZNF528Q3MIS6 628 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 PABPC1LQ4VXU2 614 aaKnown RBP17.73■□□□□ 0.43
MUC1-220ENST00000498431 GLRA4Q5JXX5 417 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 CD300LGQ6UXG3 332 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.73■□□□□ 0.43
MUC1-220ENST00000498431 CATSPER3Q86XQ3 398 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 MCPH1Q8NEM0 835 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 PLA2G2FQ9BZM2 168 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 MTRRQ9UBK8 725 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 FBXO4Q9UKT5 387 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 CDY1Q9Y6F8 540 aa17.73■□□□□ 0.43
MUC1-220ENST00000498431 I3L4J1 428 aa17.72■□□□□ 0.43
MUC1-220ENST00000498431 TARSP26639 723 aaKnown RBP17.72■□□□□ 0.43
MUC1-220ENST00000498431 TKTP29401 623 aaKnown RBP17.72■□□□□ 0.43
MUC1-220ENST00000498431 RSPO4Q2I0M5 234 aaPredicted RBP17.72■□□□□ 0.43
MUC1-220ENST00000498431 UVSSAQ2YD98 709 aa17.72■□□□□ 0.43
MUC1-220ENST00000498431 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
MUC1-220ENST00000498431 C3orf58Q8NDZ4 430 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms