RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 KIAA1586Q9HCI6 787 aa14.75□□□□□ -0.05
CPNE1-227ENST00000498056 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
CPNE1-227ENST00000498056 CXXC1Q9P0U4 656 aaPredicted RBP14.75□□□□□ -0.05
CPNE1-227ENST00000498056 SLC4A7Q9Y6M7 1214 aa14.75□□□□□ -0.05
CPNE1-227ENST00000498056 COL4A4P53420 1690 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-227ENST00000498056 PLXNA4Q9HCM2 1894 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 ZNF623O75123 536 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 KRT13P13646 458 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 GATMP50440 423 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 CYP24A1Q07973 514 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 PAN2Q504Q3 1202 aaKnown RBP14.74□□□□□ -0.05
CPNE1-227ENST00000498056 CLLU1OSQ5K130 101 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 TCERG1LQ5VWI1 586 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 GLB1LQ6UWU2 654 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 AGMOQ6ZNB7 445 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 MRPL10Q7Z7H8 261 aaKnown RBP14.74□□□□□ -0.05
CPNE1-227ENST00000498056 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
CPNE1-227ENST00000498056 URGCPQ8TCY9 931 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 CCDC127Q96BQ5 260 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 FBXL18Q96ME1 805 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 SLC9A7Q96T83 725 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 MKNK1Q9BUB5 465 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 THAP9Q9H5L6 903 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 RNF19AQ9NV58 838 aa14.74□□□□□ -0.05
CPNE1-227ENST00000498056 MAGEC2Q9UBF1 373 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-227ENST00000498056 ARL5CA6NH57 179 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 SMTNL1A8MU46 457 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 GOLGA6L19H0YKK7 550 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 IKBKBO14920 756 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 HOXA2O43364 376 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 IL18RAPO95256 599 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 EOMESO95936 686 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 NFICP08651 508 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 DLATP10515 647 aaKnown RBP14.73□□□□□ -0.05
CPNE1-227ENST00000498056 MTIF2P46199 727 aaKnown RBP14.73□□□□□ -0.05
CPNE1-227ENST00000498056 SCNN1GP51170 649 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 WNT7BP56706 349 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 TPM4P67936 248 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 SPAG1Q07617 926 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 BFSP1Q12934 665 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 LMBRD2Q68DH5 695 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-227ENST00000498056 KIF12Q96FN5 646 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 FNBP1Q96RU3 617 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 GAD1Q99259 594 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 MMRN2Q9H8L6 949 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 PDE11AQ9HCR9 933 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 UBN1Q9NPG3 1134 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 SAMSN1Q9NSI8 373 aaKnown RBP14.73□□□□□ -0.05
CPNE1-227ENST00000498056 FANCLQ9NW38 375 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 GIT1Q9Y2X7 761 aa14.73□□□□□ -0.05
CPNE1-227ENST00000498056 TBKBP1A7MCY6 615 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 KCNJ18B7U540 433 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 MEFVO15553 781 aaPredicted RBP14.72□□□□□ -0.05
CPNE1-227ENST00000498056 GNA14O95837 355 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 TRIM49P0CI25 452 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 TRIM49CP0CI26 452 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 ATP2A2P16615 1042 aaKnown RBP14.72□□□□□ -0.05
CPNE1-227ENST00000498056 KCNJ12Q14500 433 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 NCAPHQ15003 741 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 PSMD6Q15008 389 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 IQCB1Q15051 598 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 SHHQ15465 462 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 SLC10A6Q3KNW5 377 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 JADE1Q6IE81 842 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 INTS8Q75QN2 995 aaKnown RBP14.72□□□□□ -0.05
CPNE1-227ENST00000498056 USP37Q86T82 979 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 TMEM174Q8WUU8 243 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 FAM84AQ96KN4 292 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 YME1L1Q96TA2 773 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 CGRRF1Q99675 332 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 GDF15Q99988 308 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 ZBED2Q9BTP6 218 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 CXCL16Q9H2A7 254 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 CNTN3Q9P232 1028 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 ARMCX3Q9UH62 379 aaPredicted RBP14.72□□□□□ -0.05
CPNE1-227ENST00000498056 ATG2AQ2TAZ0 1938 aa14.72□□□□□ -0.05
CPNE1-227ENST00000498056 PTPRJQ12913 1337 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 VWA8A3KMH1 1905 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 TTC26A0AVF1 554 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 LACTBL1A8MY62 500 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 MAPK13O15264 365 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 CLSTN1O94985 981 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 POMCP01189 267 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 TMEM191BP0C7N4 346 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 TNNI1P19237 187 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 VAMP7P51809 220 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 AFF1P51825 1210 aaKnown RBP14.71□□□□□ -0.05
CPNE1-227ENST00000498056 FAM189BP81408 668 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 TFAMQ00059 246 aaKnown RBP14.71□□□□□ -0.05
CPNE1-227ENST00000498056 RNASELQ05823 741 aaKnown RBP14.71□□□□□ -0.05
CPNE1-227ENST00000498056 GRIK3Q13003 919 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 TMEM132DQ14C87 1099 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 SURF1Q15526 300 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 CDKAL1Q5VV42 579 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 FILIP1Q7Z7B0 1213 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 EFCAB13Q8IY85 973 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 LRRC43Q8N309 656 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 PLEKHO2Q8TD55 490 aa14.71□□□□□ -0.05
CPNE1-227ENST00000498056 TOP1MTQ969P6 601 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms