RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 IDEP14735 1019 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 DNAJB1P25685 340 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 GRM5P41594 1212 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 ALDH7A1P49419 539 aaKnown RBP12.31□□□□□ -0.44
ERCC8-208ENST00000497892 SCNN1GP51170 649 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 BCAR1P56945 870 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 PLCB3Q01970 1234 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 DSC1Q08554 894 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 GRIK3Q13003 919 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 CAMK1Q14012 370 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.44
ERCC8-208ENST00000497892 TIGD5Q53EQ6 642 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 ZC2HC1CQ53FD0 456 aaPredicted RBP12.31□□□□□ -0.44
ERCC8-208ENST00000497892 NUDT18Q6ZVK8 323 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 ZNF720Q7Z2F6 126 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 ZNF280BQ86YH2 543 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 CCDC65Q8IXS2 484 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 THNSL1Q8IYQ7 743 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 MICALL1Q8N3F8 863 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 CEP120Q8N960 986 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 SPPL3Q8TCT6 385 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 C7orf25Q9BPX7 421 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 TMEM175Q9BSA9 504 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 TCHPQ9BT92 498 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 STRA6Q9BX79 667 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 MRPL44Q9H9J2 332 aaKnown RBP12.31□□□□□ -0.44
ERCC8-208ENST00000497892 PANK4Q9NVE7 773 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 SNTG2Q9NY99 539 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 KLK14Q9P0G3 267 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 DNAJB4Q9UDY4 337 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 PARP2Q9UGN5 583 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 USP25Q9UHP3 1055 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 UNC80Q8N2C7 3258 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 PTGESO14684 152 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 CLDN3O15551 220 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 DDHD2O94830 711 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 LIG4P49917 911 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 NDUFA8P51970 172 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 ASIC1P78348 528 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 MCL1Q07820 350 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 COASYQ13057 564 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 ALCAMQ13740 583 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 HERC4Q5GLZ8 1057 aaPredicted RBP12.3□□□□□ -0.44
ERCC8-208ENST00000497892 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 TMEM173Q86WV6 379 aaPredicted RBP12.3□□□□□ -0.44
ERCC8-208ENST00000497892 COLGALT2Q8IYK4 626 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 CEP57L1Q8IYX8 460 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 FSIP1Q8NA03 581 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 POF1BQ8WVV4 589 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 MRPS27Q92552 414 aaKnown RBP12.3□□□□□ -0.44
ERCC8-208ENST00000497892 BICD1Q96G01 975 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 RPS6KC1Q96S38 1066 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
ERCC8-208ENST00000497892 GBP3Q9H0R5 595 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 SPG21Q9NZD8 308 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 LZTS1Q9Y250 596 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 GDAQ9Y2T3 454 aa12.3□□□□□ -0.44
ERCC8-208ENST00000497892 GALTP07902 379 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 SYKP43405 635 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 SLC11A1P49279 550 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 CASP5P51878 434 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 PLCB2Q00722 1185 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 CCDC85BQ15834 202 aaPredicted RBP12.29□□□□□ -0.44
ERCC8-208ENST00000497892 SLC39A4Q6P5W5 647 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 BCL7CQ8WUZ0 217 aaPredicted RBP12.29□□□□□ -0.44
ERCC8-208ENST00000497892 TMEM169Q96HH4 297 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 ZBTB45Q96K62 511 aaPredicted RBP12.29□□□□□ -0.44
ERCC8-208ENST00000497892 FAM193BQ96PV7 902 aaPredicted RBP12.29□□□□□ -0.44
ERCC8-208ENST00000497892 FGFBP2Q9BYJ0 223 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 HAPLN2Q9GZV7 340 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 BLZF1Q9H2G9 400 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 GOLPH3LQ9H4A5 285 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 NSUN3Q9H649 340 aaKnown RBP12.29□□□□□ -0.44
ERCC8-208ENST00000497892 TLR9Q9NR96 1032 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 TOPORSQ9NS56 1045 aaPredicted RBP12.29□□□□□ -0.44
ERCC8-208ENST00000497892 MIOSQ9NXC5 875 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 CHMP5Q9NZZ3 219 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 TBC1D7Q9P0N9 293 aa12.29□□□□□ -0.44
ERCC8-208ENST00000497892 SPTBN5Q9NRC6 3674 aaKnown RBP12.28□□□□□ -0.44
ERCC8-208ENST00000497892 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 ANK1P16157 1881 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 NT5C1B-RDH14C9J2C7 533 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 FAM189A1O60320 539 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 GCNT3O95395 438 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 MYL1P05976 194 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 MYBP10242 640 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 HARSP12081 509 aaKnown RBP12.28□□□□□ -0.44
ERCC8-208ENST00000497892 CASP1P29466 404 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 IRS1P35568 1242 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 MLLT3P42568 568 aaPredicted RBP12.28□□□□□ -0.44
ERCC8-208ENST00000497892 AFMP43652 599 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
ERCC8-208ENST00000497892 OSTNP61366 133 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 KRT17Q04695 432 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 EHHADHQ08426 723 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 CUL4BQ13620 913 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 NAB2Q15742 525 aa12.28□□□□□ -0.44
ERCC8-208ENST00000497892 XKR4Q5GH76 650 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms