RNA–Protein interactions for RNA: ENST00000497802.1

PLXNA3-209, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-209ENST00000497802 ZNF707Q96C28 371 aaPredicted RBP16.04■□□□□ 0.16
PLXNA3-209ENST00000497802 ZMAT2Q96NC0 199 aaKnown RBP16.04■□□□□ 0.16
PLXNA3-209ENST00000497802 PPP1R10Q96QC0 940 aaKnown RBP16.04■□□□□ 0.16
PLXNA3-209ENST00000497802 NR2E1Q9Y466 385 aa16.04■□□□□ 0.16
PLXNA3-209ENST00000497802 ZNF318Q5VUA4 2279 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 GUCY2CP25092 1073 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 BRCC3P46736 316 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 SIGLEC14Q08ET2 396 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 KARSQ15046 597 aaKnown RBP16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 SF3A1Q15459 793 aaKnown RBP16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 USP49Q70CQ1 688 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 SYT2Q8N9I0 419 aaPredicted RBP16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 LNX1Q8TBB1 728 aaPredicted RBP16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 CLSTN3Q9BQT9 956 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 HAPLN2Q9GZV7 340 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 CLIC4Q9Y696 253 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
PLXNA3-209ENST00000497802 SF3B1O75533 1304 aaKnown RBP eCLIP16.02■□□□□ 0.162e-12■■■■■ 103.4
PLXNA3-209ENST00000497802 DENND4AQ7Z401 1863 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 SMIM28A0A1B0GU29 152 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 PLS3P13797 630 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 PROZP22891 400 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 GRM5P41594 1212 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 SPAG1Q07617 926 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 LILRA6Q6PI73 481 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 TMEM161BQ8NDZ6 487 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 RSAD2Q8WXG1 361 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 C18orf25Q96B23 403 aaPredicted RBP16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 CDK5RAP3Q96JB5 506 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 DRC1Q96MC2 740 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 TCHPQ9BT92 498 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 TTPALQ9BTX7 342 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 TMEM134Q9H6X4 195 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 BLOC1S4Q9NUP1 217 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 ANKFY1Q9P2R3 1169 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 STK39Q9UEW8 545 aa16.02■□□□□ 0.16
PLXNA3-209ENST00000497802 ZDBF2Q9HCK1 2354 aa16.02■□□□□ 0.15
PLXNA3-209ENST00000497802 MYO10Q9HD67 2058 aa16.02■□□□□ 0.15
PLXNA3-209ENST00000497802 ZMYM2Q9UBW7 1377 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 TRIP11Q15643 1979 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 B3GAT3O94766 335 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 MAPTP10636 758 aaKnown RBP16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 PLCG1P19174 1290 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 TKTP29401 623 aaKnown RBP16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 NTHL1P78549 312 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 MCM6Q14566 821 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 PSMD5Q16401 504 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 ZBTB41Q5SVQ8 909 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 ALKAL1Q6UXT8 129 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 CCDC149Q6ZUS6 474 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 GPBP1Q86WP2 473 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 PRSS33Q8NF86 280 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 SMG7Q92540 1137 aaKnown RBP16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 SNX27Q96L92 541 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 MYADMQ96S97 322 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 PHOX2BQ99453 314 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 REEP2Q9BRK0 252 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 SSX2IPQ9Y2D8 614 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 VWA8A3KMH1 1905 aa16.01■□□□□ 0.15
PLXNA3-209ENST00000497802 NARSO43776 548 aaKnown RBP16■□□□□ 0.15
PLXNA3-209ENST00000497802 MARCKSP29966 332 aaPredicted RBP16■□□□□ 0.15
PLXNA3-209ENST00000497802 RESTQ13127 1097 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 MPZL3Q6UWV2 235 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 ZDHHC14Q8IZN3 488 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 EPSTI1Q96J88 318 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 MFSD14AQ96MC6 490 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 CCDC94Q9BW85 323 aaPredicted RBP16■□□□□ 0.15
PLXNA3-209ENST00000497802 BACH2Q9BYV9 841 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 FNIP2Q9P278 1114 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 SORCS3Q9UPU3 1222 aa16■□□□□ 0.15
PLXNA3-209ENST00000497802 MCF2P10911 925 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 FGFR3P22607 806 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 GBP2P32456 591 aaPredicted RBP15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 UBA7P41226 1012 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 MTMR3Q13615 1198 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 PTPAQ15257 358 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 UPP1Q16831 310 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 XKR4Q5GH76 650 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 BMP8AQ7Z5Y6 402 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 FBXL6Q8N531 539 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 CMASQ8NFW8 434 aaPredicted RBP15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 SPIRE2Q8WWL2 714 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 PIK3R5Q8WYR1 880 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 CLIC6Q96NY7 704 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 NTPCRQ9BSD7 190 aaKnown RBP15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 TUBGCP4Q9UGJ1 667 aa15.99■□□□□ 0.15
PLXNA3-209ENST00000497802 CLUHO75153 1309 aa15.98■□□□□ 0.15
PLXNA3-209ENST00000497802 CCL16O15467 120 aa15.98■□□□□ 0.15
PLXNA3-209ENST00000497802 SYT1P21579 422 aa15.98■□□□□ 0.15
PLXNA3-209ENST00000497802 OR1D2P34982 312 aa15.98■□□□□ 0.15
PLXNA3-209ENST00000497802 TNFSF9P41273 254 aa15.98■□□□□ 0.15
PLXNA3-209ENST00000497802 GUCY2FP51841 1108 aa15.98■□□□□ 0.15
PLXNA3-209ENST00000497802 YARSP54577 528 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms