RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 TMEM161BQ8NDZ6 487 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 ZNF507Q8TCN5 953 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 ASAP3Q8TDY4 903 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 PPP1R13LQ8WUF5 828 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 WNT8BQ93098 351 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 TOP1MTQ969P6 601 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 RMDN1Q96DB5 314 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 SAMD11Q96NU1 681 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 RAD9AQ99638 391 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 ADAM2Q99965 735 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 TCHPQ9BT92 498 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 ZBED2Q9BTP6 218 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 AGO3Q9H9G7 860 aaKnown RBP6.66□□□□□ -1.34
HMGCL-206ENST00000496907 CDHR5Q9HBB8 845 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 GPRC5CQ9NQ84 441 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 TLR9Q9NR96 1032 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 TOPORSQ9NS56 1045 aaPredicted RBP6.66□□□□□ -1.34
HMGCL-206ENST00000496907 LMBRD1Q9NUN5 540 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 TMEM161AQ9NX61 479 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 TBC1D7Q9P0N9 293 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 TBX20Q9UMR3 447 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 PIN4Q9Y237 131 aaKnown RBP6.66□□□□□ -1.34
HMGCL-206ENST00000496907 RWDD3Q9Y3V2 267 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 INSL6Q9Y581 213 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 PCDHGA10Q9Y5H3 936 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 CNTNAP2Q9UHC6 1331 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 ZMYM2Q9UBW7 1377 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 PLXNA3P51805 1871 aa6.66□□□□□ -1.34
HMGCL-206ENST00000496907 EP300Q09472 2414 aaPredicted RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 A0A087X0B3 334 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 LCHNA4D1U4 455 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 PRR23AA6NEV1 266 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 H3BQ06 376 aaPredicted RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 K7ENM7 598 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 SLC16A4O15374 487 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 XPOTO43592 962 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 NR1I2O75469 434 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 GCNT3O95395 438 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 FGFR1OPO95684 399 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 RPN1P04843 607 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 MCF2P10911 925 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 GARTP22102 1010 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 RPL13P26373 211 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 HOXA11P31270 313 aaPredicted RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 MCM4P33991 863 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 LIG4P49917 911 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 YARSP54577 528 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 RAD51AP2Q09MP3 1159 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 DPYDQ12882 1025 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 COASYQ13057 564 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 MBTPS1Q14703 1052 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 SURF1Q15526 300 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 COBLL1Q53SF7 1204 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 L1TD1Q5T7N2 865 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 NT5DC1Q5TFE4 455 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 ATF7IP2Q5U623 682 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 FOXR2Q6PJQ5 311 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 GLB1LQ6UWU2 654 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 TMCO2Q7Z6W1 182 aaPredicted RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 MRPL10Q7Z7H8 261 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 USP37Q86T82 979 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 SFR1Q86XK3 245 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 MAP4K3Q8IVH8 894 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 ABI1Q8IZP0 508 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 MYOCDQ8IZQ8 938 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 SPATA20Q8TB22 786 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 TMEM174Q8WUU8 243 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 TMEM40Q8WWA1 233 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 VWCEQ96DN2 955 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 BICD1Q96G01 975 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 ACO2Q99798 780 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 ANP32EQ9BTT0 268 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 CCDC94Q9BW85 323 aaPredicted RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 MRPL9Q9BYD2 267 aaKnown RBP6.65□□□□□ -1.34
HMGCL-206ENST00000496907 CCDC113Q9H0I3 377 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 PLEKHA5Q9HAU0 1116 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 AAASQ9NRG9 546 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 FAM105AQ9NUU6 356 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 GIT1Q9Y2X7 761 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 PTPRSQ13332 1948 aa6.65□□□□□ -1.34
HMGCL-206ENST00000496907 SIP14410 1827 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 TECTAO75443 2155 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 NPHP3-ACAD11A0A0J9YXS1 232 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 BICDL2A1A5D9 508 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 GRXCR2A6NFK2 248 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 C9IYK1 514 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 PDXKO00764 312 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 HNRNPDLO14979 420 aaKnown RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 CALUO43852 315 aaPredicted RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 TSPAN1O60635 241 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 GJB5O95377 273 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 RB1P06400 928 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 CLTAP09496 248 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 ITGA4P13612 1032 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 ARF4P18085 180 aaPredicted RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 MATR3P43243 847 aaKnown RBP eCLIP6.64□□□□□ -1.352e-8■■■□□ 16.9
HMGCL-206ENST00000496907 WDR5P61964 334 aaKnown RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 MCL1Q07820 350 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 EHHADHQ08426 723 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms