RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 RAP2AP10114 183 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 FPR1P21462 350 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 PCSK1P29120 753 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 ALDH1A3P47895 512 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 PTTG1IPP53801 180 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 IGBP1P78318 339 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 ODF1Q14990 250 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 RRP12Q5JTH9 1297 aaKnown RBP6.45□□□□□ -1.38
SNX13-211ENST00000496855 FNDC7Q5VTL7 733 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 IGFL4Q6B9Z1 124 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 RHOT1Q8IXI2 618 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 CPT1CQ8TCG5 803 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 MRI1Q9BV20 369 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 NARSO43776 548 aaKnown RBP6.44□□□□□ -1.38
SNX13-211ENST00000496855 GPR32O75388 356 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 ZNF202O95125 648 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 AMY1AP04745 511 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 KIF23Q02241 960 aaPredicted RBP6.44□□□□□ -1.38
SNX13-211ENST00000496855 NHLH2Q02577 135 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 ATXN7L2Q5T6C5 722 aaPredicted RBP6.44□□□□□ -1.38
SNX13-211ENST00000496855 OTUD7BQ6GQQ9 843 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 MIGA2Q7L4E1 593 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 ZNF276Q8N554 614 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 HDAC10Q969S8 669 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 COA7Q96BR5 231 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 FAM193BQ96PV7 902 aaPredicted RBP6.44□□□□□ -1.38
SNX13-211ENST00000496855 DCLRE1CQ96SD1 692 aaKnown RBP6.44□□□□□ -1.38
SNX13-211ENST00000496855 TYW1Q9NV66 732 aaKnown RBP6.44□□□□□ -1.38
SNX13-211ENST00000496855 LIMCH1Q9UPQ0 1083 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 IPPQ9Y573 584 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 ACTL7AQ9Y615 435 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 PNPLA7Q6ZV29 1317 aa6.44□□□□□ -1.38
SNX13-211ENST00000496855 AHRRA9YTQ3 701 aa6.43□□□□□ -1.38
SNX13-211ENST00000496855 TEX33O43247 280 aa6.43□□□□□ -1.38
SNX13-211ENST00000496855 HTRA2O43464 458 aaPredicted RBP6.43□□□□□ -1.38
SNX13-211ENST00000496855 FSHBP01225 129 aa6.43□□□□□ -1.38
SNX13-211ENST00000496855 ATP5JP18859 108 aa6.43□□□□□ -1.38
SNX13-211ENST00000496855 ADKP55263 362 aaKnown RBP6.43□□□□□ -1.38
SNX13-211ENST00000496855 MTM1Q13496 603 aa6.43□□□□□ -1.38
SNX13-211ENST00000496855 ZGPATQ8N5A5 531 aaKnown RBP6.43□□□□□ -1.38
SNX13-211ENST00000496855 SLC25A43Q8WUT9 341 aaPredicted RBP6.43□□□□□ -1.38
SNX13-211ENST00000496855 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
SNX13-211ENST00000496855 SLC2A4RGQ9NR83 387 aa6.43□□□□□ -1.38
SNX13-211ENST00000496855 HS3ST3A1Q9Y663 406 aa6.43□□□□□ -1.38
SNX13-211ENST00000496855 MYBBP1AQ9BQG0 1328 aaKnown RBP6.43□□□□□ -1.38
SNX13-211ENST00000496855 DDCP20711 480 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 EDNRBP24530 442 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 ACVRL1P37023 503 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 GDF5P43026 501 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 RECQLP46063 649 aaPredicted RBP6.42□□□□□ -1.38
SNX13-211ENST00000496855 RAP2BP61225 183 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 ATP8B2P98198 1209 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 USP51Q70EK9 711 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 GDF7Q7Z4P5 450 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 DRC7Q8IY82 874 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 ZNF483Q8TF39 744 aaPredicted RBP6.42□□□□□ -1.38
SNX13-211ENST00000496855 CHMP4CQ96CF2 233 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 TMPRSS5Q9H3S3 457 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 DDX56Q9NY93 547 aaKnown RBP6.42□□□□□ -1.38
SNX13-211ENST00000496855 GPRC5BQ9NZH0 403 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 TRPM5Q9NZQ8 1165 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 SLC23A1Q9UHI7 598 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 SERPINB13Q9UIV8 391 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 REXO2Q9Y3B8 237 aaKnown RBP6.42□□□□□ -1.38
SNX13-211ENST00000496855 CHST2Q9Y4C5 530 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 PCDHA13Q9Y5I0 950 aa6.42□□□□□ -1.38
SNX13-211ENST00000496855 CCDC154A6NI56 674 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 DRGXA6NNA5 263 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 DIRC3C9JPN6 131 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 SNUPNO95149 360 aaKnown RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 ZSCAN20P17040 1043 aaPredicted RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 CHN2P52757 468 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 RNASE9P60153 205 aaKnown RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 C3orf36Q3SXR2 165 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 SEM1Q6ZVN7 128 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 ZBTB46Q86UZ6 589 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 FAM9AQ8IZU1 332 aaPredicted RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 SLC16A11Q8NCK7 471 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 STAG1Q8WVM7 1258 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 MYOCQ99972 504 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 SLC46A2Q9BY10 475 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 SCAND2PQ9GZW5 306 aaPredicted RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 ZNF768Q9H5H4 540 aaKnown RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 NRDE2Q9H7Z3 1164 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 MMRN2Q9H8L6 949 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 TDP1Q9NUW8 608 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 FAM30AQ9NZY2 134 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 RUVBL1Q9Y265 456 aaKnown RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 RPS6KA4O75676 772 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 ZRANB2O95218 330 aaKnown RBP eCLIP6.41□□□□□ -1.38
SNX13-211ENST00000496855 POMCP01189 267 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 MAKP20794 623 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 NR4A1P22736 598 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 MCM7P33993 719 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 PTGS2P35354 604 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 NEK2P51955 445 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 CDC42EP1Q00587 391 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 ABHD18Q0P651 414 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 TARDBPQ13148 414 aaKnown RBP eCLIP6.41□□□□□ -1.38
SNX13-211ENST00000496855 IL10RAQ13651 578 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms