RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 ELAC1Q9H777 363 aaKnown RBP15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 MAGEC2Q9UBF1 373 aaPredicted RBP15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 LIMA1Q9UHB6 759 aaKnown RBP15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 NR2E3Q9Y5X4 410 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 SCN1AP35498 2009 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 TULP1O00294 542 aaPredicted RBP15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 ITGA4P13612 1032 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 ALKAL1Q6UXT8 129 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 APTXQ7Z2E3 356 aaKnown RBP15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 HACE1Q8IYU2 909 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 LPPQ93052 612 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 PGBD4Q96DM1 585 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 SNX27Q96L92 541 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 PDE11AQ9HCR9 933 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 TMEM161AQ9NX61 479 aa15.16■□□□□ 0.02
ATPAF2-208ENST00000496852 LRRC10BA6NIK2 292 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 EFCAB14O75071 495 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 BAIAP3O94812 1187 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 IL18RAPO95256 599 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 SERPINC1P01008 464 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 ACTN1P12814 892 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 KRT13P13646 458 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 MTIF2P46199 727 aaKnown RBP15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 VAMP7P51809 220 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 DLG4P78352 724 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 CLDN10P78369 228 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 KRT31Q15323 416 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 SURF1Q15526 300 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 XKR4Q5GH76 650 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 C1orf220Q5T0J3 134 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 ZNF365Q70YC5 407 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 SLC35C1Q96A29 364 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 CXCL16Q9H2A7 254 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 ASB7Q9H672 318 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 PLEKHA5Q9HAU0 1116 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 TOPORSQ9NS56 1045 aaPredicted RBP15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 PARP2Q9UGN5 583 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
ATPAF2-208ENST00000496852 LRRIQ3A6PVS8 624 aaPredicted RBP15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 LACTBL1A8MY62 500 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 FGBP02675 491 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 RGS19P49795 217 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 PPP2R3AQ06190 1150 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 MAN2A1Q16706 1144 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 TMEM240Q5SV17 173 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 PSRC1Q6PGN9 363 aaPredicted RBP15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 NLRC5Q86WI3 1866 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 CD302Q8IX05 232 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 CCDC127Q96BQ5 260 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 LBHD1Q9BQE6 289 aaPredicted RBP15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 TUBGCP2Q9BSJ2 902 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 TRIM5Q9C035 493 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 KLK14Q9P0G3 267 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 CNTN3Q9P232 1028 aa15.14■□□□□ 0.01
ATPAF2-208ENST00000496852 PTPRJQ12913 1337 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 INPPL1O15357 1258 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 TRIM49P0CI25 452 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 TRIM49CP0CI26 452 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 WDR5P61964 334 aaKnown RBP15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 DCAF17Q5H9S7 520 aaPredicted RBP15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 MIIPQ5JXC2 388 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 USP37Q86T82 979 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 EFCAB13Q8IY85 973 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 RNF169Q8NCN4 708 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 GSTCDQ8NEC7 633 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 ANKRD20A12PQ8NF67 263 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 POP1Q99575 1024 aaKnown RBP15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 CGRRF1Q99675 332 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 RSAD1Q9HA92 442 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 UBN1Q9NPG3 1134 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 RNF19AQ9NV58 838 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 TAB2Q9NYJ8 693 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 CEP290O15078 2479 aa15.13■□□□□ 0.01
ATPAF2-208ENST00000496852 DLATP10515 647 aaKnown RBP15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 IBSPP21815 317 aaPredicted RBP15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 MLH1P40692 756 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 COPB1P53618 953 aaKnown RBP15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 FANCCQ00597 558 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 CLLU1OSQ5K130 101 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 TCERG1LQ5VWI1 586 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 JADE1Q6IE81 842 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 OTOP2Q7RTS6 562 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 NPAS4Q8IUM7 802 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 WDR49Q8IV35 697 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 ZNF516Q92618 1163 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 ZFP42Q96MM3 310 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 ZMAT2Q96NC0 199 aaKnown RBP15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 FNBP1Q96RU3 617 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 GAD1Q99259 594 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 PCDHB7Q9Y5E2 793 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 SMIM28A0A1B0GU29 152 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 ARL5CA6NH57 179 aa15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 PES1O00541 588 aaKnown RBP15.12■□□□□ 0.01
ATPAF2-208ENST00000496852 PTGESO14684 152 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms