RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SORCS3Q9UPU3 1222 aa5.1□□□□□ -1.59
CD46-218ENST00000496723 HDAC5Q9UQL6 1122 aa5.1□□□□□ -1.59
CD46-218ENST00000496723 LAG3P18627 525 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 PTPN7P35236 360 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 ATXN1P54253 815 aaKnown RBP5.09□□□□□ -1.59
CD46-218ENST00000496723 PER3P56645 1201 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 PRAMEF14Q5SWL7 426 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 REPS2Q8NFH8 660 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 OR7D4Q8NG98 312 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 JADE3Q92613 823 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 MYEOVQ96EZ4 313 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 FAM193BQ96PV7 902 aaPredicted RBP5.09□□□□□ -1.59
CD46-218ENST00000496723 UHRF1Q96T88 793 aaPredicted RBP5.09□□□□□ -1.59
CD46-218ENST00000496723 LSM14BQ9BX40 385 aaKnown RBP5.09□□□□□ -1.59
CD46-218ENST00000496723 SLC46A2Q9BY10 475 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 BCO1Q9HAY6 547 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 CYP4F11Q9HBI6 524 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 HOMER2Q9NSB8 354 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 DNM3Q9UQ16 869 aa5.09□□□□□ -1.59
CD46-218ENST00000496723 NOP58Q9Y2X3 529 aaKnown RBP5.09□□□□□ -1.59
CD46-218ENST00000496723 SHTN1A0MZ66 631 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 KLHL33A6NCF5 533 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 XPOTO43592 962 aaKnown RBP5.08□□□□□ -1.6
CD46-218ENST00000496723 SCAF4O95104 1147 aaKnown RBP5.08□□□□□ -1.6
CD46-218ENST00000496723 RBP3P10745 1247 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 HSP90B1P14625 803 aaKnown RBP5.08□□□□□ -1.6
CD46-218ENST00000496723 IL12RB1P42701 662 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 GJC2Q5T442 439 aaPredicted RBP5.08□□□□□ -1.6
CD46-218ENST00000496723 HECTD2Q5U5R9 776 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 STRIP1Q5VSL9 837 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 ANKS6Q68DC2 871 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 SYCE2Q6PIF2 218 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 OLFML1Q6UWY5 402 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 DOK3Q7L591 496 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 ADGRG3Q86Y34 549 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 TRMT2AQ8IZ69 625 aaKnown RBP5.08□□□□□ -1.6
CD46-218ENST00000496723 PQLC1Q8N2U9 271 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.08□□□□□ -1.6
CD46-218ENST00000496723 FBXO18Q8NFZ0 1043 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 SSH1Q8WYL5 1049 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 HOXB13Q92826 284 aaPredicted RBP5.08□□□□□ -1.6
CD46-218ENST00000496723 CEP95Q96GE4 821 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 FUBP3Q96I24 572 aaKnown RBP eCLIP5.08□□□□□ -1.61e-11■■□□□ 12.2
CD46-218ENST00000496723 SMAD5Q99717 465 aaKnown RBP5.08□□□□□ -1.6
CD46-218ENST00000496723 CPEB1Q9BZB8 566 aaKnown RBP5.08□□□□□ -1.6
CD46-218ENST00000496723 KCNH6Q9H252 994 aa5.08□□□□□ -1.6
CD46-218ENST00000496723 TNKSO95271 1327 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 hCG_2014768A0A024R1R8 64 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 PRR5-ARHGAP8B1AHC4 643 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 MASP2O00187 686 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 PCDHGA12O60330 932 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 CD38P28907 300 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 SREBF1P36956 1147 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 C21orf58P58505 322 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 MGAT2Q10469 447 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 PCBP2Q15366 365 aaKnown RBP eCLIP5.07□□□□□ -1.64e-15■□□□□ 11.1
CD46-218ENST00000496723 PTPN21Q16825 1174 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 MFSD14BQ5SR56 506 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 PNMA8AQ86V59 439 aaPredicted RBP5.07□□□□□ -1.6
CD46-218ENST00000496723 OR52N2Q8NGI0 321 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 NTN5Q8WTR8 489 aaPredicted RBP5.07□□□□□ -1.6
CD46-218ENST00000496723 NRG4Q8WWG1 115 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 ASPSCR1Q9BZE9 553 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 SPON1Q9HCB6 807 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 ADARB2Q9NS39 739 aaKnown RBP5.07□□□□□ -1.6
CD46-218ENST00000496723 PCDHGA9Q9Y5G4 932 aaKnown RBP5.07□□□□□ -1.6
CD46-218ENST00000496723 PCDHGA8Q9Y5G5 932 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 PCDHGA7Q9Y5G6 932 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 PCDHGA6Q9Y5G7 932 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 PCDHGA3Q9Y5H0 932 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 MRFAP1Q9Y605 127 aa5.07□□□□□ -1.6
CD46-218ENST00000496723 B5MCH6 92 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 FZD9O00144 591 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 NDUFS2O75306 463 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 ENDOD1O94919 500 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 C5AR1P21730 350 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 FLT3LGP49771 235 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 USP14P54578 494 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 ANAPC15P60006 121 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 SEPT2Q15019 361 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 VPS72Q15906 364 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 CSRP2Q16527 193 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 BRDTQ58F21 947 aaPredicted RBP5.06□□□□□ -1.6
CD46-218ENST00000496723 FAM47AQ5JRC9 791 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 ZNF572Q7Z3I7 529 aaPredicted RBP5.06□□□□□ -1.6
CD46-218ENST00000496723 OR2I1PQ8NGU4 316 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 STON2Q8WXE9 905 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 DPF2Q92785 391 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 BBC3Q96PG8 261 aaPredicted RBP5.06□□□□□ -1.6
CD46-218ENST00000496723 DCLRE1CQ96SD1 692 aaKnown RBP5.06□□□□□ -1.6
CD46-218ENST00000496723 SENP6Q9GZR1 1112 aaPredicted RBP5.06□□□□□ -1.6
CD46-218ENST00000496723 LDAHQ9H6V9 325 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 EIF2B4Q9UI10 523 aaKnown RBP5.06□□□□□ -1.6
CD46-218ENST00000496723 TUBD1Q9UJT1 453 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 INTUQ9ULD6 942 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 CLCA2Q9UQC9 943 aa5.06□□□□□ -1.6
CD46-218ENST00000496723 GAGE12BA1L429 117 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 GAGE12HA6NDE8 117 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 TBKBP1A7MCY6 615 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 FAM171A2A8MVW0 826 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms