RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 MICALL1Q8N3F8 863 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 MREGQ8N565 214 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 PPP1R16BQ96T49 567 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 NAP1L3Q99457 506 aaPredicted RBP12.36□□□□□ -0.43
CDCA7-208ENST00000496441 SEMA4AQ9H3S1 761 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 ACAD9Q9H845 621 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 FAM169AQ9Y6X4 670 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 POLR2AP24928 1970 aaKnown RBP12.36□□□□□ -0.43
CDCA7-208ENST00000496441 H0YGN5 161 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 K7ERI5 159 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 CAND2O75155 1236 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 DGAT1O75907 488 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 RARAP10276 462 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 SCP2P22307 547 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 RFX1P22670 979 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 POU5F1Q01860 360 aaKnown RBP12.36□□□□□ -0.43
CDCA7-208ENST00000496441 SLC29A2Q14542 456 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 CCDC38Q502W7 563 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 NCAPG2Q86XI2 1143 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 TRIM50Q86XT4 487 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 DEPTORQ8TB45 409 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 ASAP3Q8TDY4 903 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 AGO2Q9UKV8 859 aaKnown RBP12.36□□□□□ -0.43
CDCA7-208ENST00000496441 NFS1Q9Y697 457 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 UMODL1Q5DID0 1318 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 FOXO6A8MYZ6 492 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 ATP2C2O75185 946 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
CDCA7-208ENST00000496441 ADCY1Q08828 1119 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 GNPTABQ3T906 1256 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 WDR44Q5JSH3 913 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
CDCA7-208ENST00000496441 FMNL3Q8IVF7 1028 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 C12orf56Q8IXR9 622 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 TMEM130Q8N3G9 435 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 GPRASP2Q96D09 838 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 CCDC114Q96M63 670 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 PWWP2AQ96N64 755 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 SELENOSQ9BQE4 189 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 HAPLN2Q9GZV7 340 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 ZNF302Q9NR11 478 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 PNMA2Q9UL42 364 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 SYNGAP1Q96PV0 1343 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 HMGB1P1B2RPK0 211 aaPredicted RBP12.35□□□□□ -0.43
CDCA7-208ENST00000496441 P4HA2O15460 535 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 ERLIN2O94905 339 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 HLA-DRAP01903 254 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 EDN1P05305 212 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 ATP4AP20648 1035 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 MDH1P40925 334 aaKnown RBP12.35□□□□□ -0.43
CDCA7-208ENST00000496441 PEX5P50542 639 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 TDRD10Q5VZ19 366 aaKnown RBP12.35□□□□□ -0.43
CDCA7-208ENST00000496441 KDM7AQ6ZMT4 941 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 MSTO1Q9BUK6 570 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 WDR81Q562E7 1941 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
CDCA7-208ENST00000496441 ZNFX1Q9P2E3 1918 aaKnown RBP12.35□□□□□ -0.43
CDCA7-208ENST00000496441 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 KIAA0391O15091 583 aaKnown RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 STBD1O95210 358 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 GPC3P51654 580 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 DUPD1Q68J44 220 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 MIS18BP1Q6P0N0 1132 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 MCPH1Q8NEM0 835 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 ACSF2Q96CM8 615 aaPredicted RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 RBAKQ9NYW8 714 aaPredicted RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 ASIC3Q9UHC3 531 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 PHF2O75151 1096 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 CSDE1O75534 798 aaKnown RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 ACSL3O95573 720 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 PGK2P07205 417 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 GJB1P08034 283 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 PMS2P54278 862 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 FAM182AQ5T1J6 154 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 KAZNQ674X7 775 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 ABHD15Q6UXT9 468 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 SLC13A5Q86YT5 568 aaPredicted RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 LRRC71Q8N4P6 559 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 ST6GALNAC4Q9H4F1 302 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 CHST7Q9NS84 486 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 RASAL2Q9UJF2 1139 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 MIF4GDA9UHW6 222 aaKnown RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 TNFSF9P41273 254 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 RWDD2BP57060 319 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 SKOR1P84550 965 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 STXBP2Q15833 593 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 LY6KQ17RY6 165 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms