RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 GFRA3O60609 400 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 KIF4AO95239 1232 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 EDN1P05305 212 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 CFHP08603 1231 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 RPA1P27694 616 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 TUSC3Q13454 348 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 FAM171A1Q5VUB5 890 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 EEF1DP3Q658K8 133 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 HAUS3Q68CZ6 603 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 SIX5Q8N196 739 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 FAM184AQ8NB25 1140 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 CMASQ8NFW8 434 aaPredicted RBP12.01□□□□□ -0.49
RNF220-217ENST00000496262 ZNF707Q96C28 371 aaPredicted RBP12.01□□□□□ -0.49
RNF220-217ENST00000496262 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
RNF220-217ENST00000496262 TMX3Q96JJ7 454 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 MYADMQ96S97 322 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 ADPGKQ9BRR6 497 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 BHMT2Q9H2M3 363 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 FOXP1Q9H334 677 aaPredicted RBP12.01□□□□□ -0.49
RNF220-217ENST00000496262 FZD8Q9H461 694 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 TSPY26PQ9H489 355 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 WDR6Q9NNW5 1121 aaKnown RBP12.01□□□□□ -0.49
RNF220-217ENST00000496262 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF220-217ENST00000496262 DUSP12Q9UNI6 340 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF220-217ENST00000496262 PLXNA3P51805 1871 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 USP34Q70CQ2 3546 aa12.01□□□□□ -0.49
RNF220-217ENST00000496262 STK25O00506 426 aa12□□□□□ -0.49
RNF220-217ENST00000496262 PTGESO14684 152 aa12□□□□□ -0.49
RNF220-217ENST00000496262 THP07101 528 aa12□□□□□ -0.49
RNF220-217ENST00000496262 CYP11B2P19099 503 aa12□□□□□ -0.49
RNF220-217ENST00000496262 RFX1P22670 979 aa12□□□□□ -0.49
RNF220-217ENST00000496262 PSMD5Q16401 504 aa12□□□□□ -0.49
RNF220-217ENST00000496262 ECM1Q16610 540 aa12□□□□□ -0.49
RNF220-217ENST00000496262 GLRA4Q5JXX5 417 aa12□□□□□ -0.49
RNF220-217ENST00000496262 CWF19L1Q69YN2 538 aaKnown RBP12□□□□□ -0.49
RNF220-217ENST00000496262 FBXO18Q8NFZ0 1043 aa12□□□□□ -0.49
RNF220-217ENST00000496262 IFT74Q96LB3 600 aa12□□□□□ -0.49
RNF220-217ENST00000496262 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
RNF220-217ENST00000496262 CCDC113Q9H0I3 377 aa12□□□□□ -0.49
RNF220-217ENST00000496262 NT5C3AQ9H0P0 336 aa12□□□□□ -0.49
RNF220-217ENST00000496262 TMEM63CQ9P1W3 806 aa12□□□□□ -0.49
RNF220-217ENST00000496262 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
RNF220-217ENST00000496262 ZKSCAN5Q9Y2L8 839 aa12□□□□□ -0.49
RNF220-217ENST00000496262 TDRD15B5MCY1 1934 aaKnown RBP11.99□□□□□ -0.49
RNF220-217ENST00000496262 C2orf16Q68DN1 1984 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 SYCE3A1L190 88 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 ACKR2O00590 384 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 PI15O43692 258 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 NAMPTP43490 491 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 HMGN5P82970 282 aaKnown RBP11.99□□□□□ -0.49
RNF220-217ENST00000496262 CREMQ03060 361 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 PPP2R5AQ15172 486 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 FAM187BQ17R55 369 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 LIN9Q5TKA1 542 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 SNX29Q8TEQ0 813 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 TTPALQ9BTX7 342 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 IRF2BPLQ9H1B7 796 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 PLEKHA4Q9H4M7 779 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 DDX19AQ9NUU7 478 aaKnown RBP11.99□□□□□ -0.49
RNF220-217ENST00000496262 FNIP2Q9P278 1114 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 IGSF9Q9P2J2 1179 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 CA14Q9ULX7 337 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 KIAA1024Q9UPX6 916 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 ZMYM2Q9UBW7 1377 aa11.99□□□□□ -0.49
RNF220-217ENST00000496262 CCDC169A6NNP5 214 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 PP2D1A8MPX8 630 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 CCL16O15467 120 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 ADAM12O43184 909 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 ZMYND10O75800 440 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 NPR3P17342 541 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 IGFBP6P24592 240 aaPredicted RBP11.98□□□□□ -0.49
RNF220-217ENST00000496262 CLCN5P51795 746 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 NUBP1P53384 320 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 OSTNP61366 133 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 NTHL1P78549 312 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 ORC2Q13416 577 aaPredicted RBP11.98□□□□□ -0.49
RNF220-217ENST00000496262 ZRSR1Q15695 479 aaKnown RBP11.98□□□□□ -0.49
RNF220-217ENST00000496262 DCAF4L1Q3SXM0 396 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 NT5DC1Q5TFE4 455 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 ATF7IP2Q5U623 682 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 GRASPQ7Z6J2 395 aaPredicted RBP11.98□□□□□ -0.49
RNF220-217ENST00000496262 HDAC7Q8WUI4 952 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 CLSTN3Q9BQT9 956 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 PRKD2Q9BZL6 878 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 PDCL3Q9H2J4 239 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 ZDHHC7Q9NXF8 308 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 EPS15L1Q9UBC2 864 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 PCDHB6Q9Y5E3 794 aa11.98□□□□□ -0.49
RNF220-217ENST00000496262 E9PMD0 336 aa11.97□□□□□ -0.49
RNF220-217ENST00000496262 I3L4J1 428 aa11.97□□□□□ -0.49
RNF220-217ENST00000496262 C8AP07357 584 aa11.97□□□□□ -0.49
RNF220-217ENST00000496262 HARSP12081 509 aaKnown RBP11.97□□□□□ -0.49
RNF220-217ENST00000496262 AOC1P19801 751 aa11.97□□□□□ -0.49
RNF220-217ENST00000496262 FSHRP23945 695 aa11.97□□□□□ -0.49
RNF220-217ENST00000496262 CDC25AP30304 524 aa11.97□□□□□ -0.49
RNF220-217ENST00000496262 TRAPPC10P48553 1259 aa11.97□□□□□ -0.49
RNF220-217ENST00000496262 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
RNF220-217ENST00000496262 CLCNKBP51801 687 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms