RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 CASTOR2A6NHX0 329 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 CNPP09543 421 aaKnown RBP18.66■□□□□ 0.58
COMMD3-214ENST00000496071 OSTNP61366 133 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 DSG1Q02413 1049 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 ITIH3Q06033 890 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 ELAVL2Q12926 359 aaKnown RBP18.66■□□□□ 0.58
COMMD3-214ENST00000496071 KIAA0319Q5VV43 1072 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 CES5AQ6NT32 575 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 SYCE2Q6PIF2 218 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 ALKAL1Q6UXT8 129 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 TAS1R1Q7RTX1 841 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 CEP120Q8N960 986 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 BICD1Q96G01 975 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 ZBTB45Q96K62 511 aaPredicted RBP18.66■□□□□ 0.58
COMMD3-214ENST00000496071 UROC1Q96N76 676 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 PPP1R10Q96QC0 940 aaKnown RBP18.66■□□□□ 0.58
COMMD3-214ENST00000496071 CD320Q9NPF0 282 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.66■□□□□ 0.58
COMMD3-214ENST00000496071 SLC38A7Q9NVC3 462 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 TBX20Q9UMR3 447 aa18.66■□□□□ 0.58
COMMD3-214ENST00000496071 SF3B1O75533 1304 aaKnown RBP eCLIP18.66■□□□□ 0.583e-6■■■■■ 44.6
COMMD3-214ENST00000496071 SMIM28A0A1B0GU29 152 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 F8W810 466 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 K7ENM7 598 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 C2CD2LO14523 706 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 ADH1AP07327 375 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 STAT6P42226 847 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 MATR3P43243 847 aaKnown RBP eCLIP18.65■□□□□ 0.58
COMMD3-214ENST00000496071 CREMQ03060 361 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 MCL1Q07820 350 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
COMMD3-214ENST00000496071 KYAT1Q16773 422 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 FOXD4L5Q5VV16 416 aaPredicted RBP18.65■□□□□ 0.58
COMMD3-214ENST00000496071 SPRYD3Q8NCJ5 442 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 FOXD4L4Q8WXT5 416 aaPredicted RBP18.65■□□□□ 0.58
COMMD3-214ENST00000496071 SUSD6Q92537 303 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 PAAF1Q9BRP4 392 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 PHF7Q9BWX1 381 aaPredicted RBP18.65■□□□□ 0.58
COMMD3-214ENST00000496071 GPR62Q9BZJ7 368 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 CXCL16Q9H2A7 254 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 RXFP1Q9HBX9 757 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 ANKFY1Q9P2R3 1169 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 DPP7Q9UHL4 492 aa18.65■□□□□ 0.58
COMMD3-214ENST00000496071 SPTBN5Q9NRC6 3674 aaKnown RBP18.64■□□□□ 0.58
COMMD3-214ENST00000496071 CUTAO60888 179 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 C1RP00736 705 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 PIGRP01833 764 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 HARSP12081 509 aaKnown RBP18.64■□□□□ 0.57
COMMD3-214ENST00000496071 KCNE1P15382 129 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 LIG4P49917 911 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 CLCN4P51793 760 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 GTF2BQ00403 316 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 ELMSAN1Q6PJG2 1045 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 DCLRE1AQ6PJP8 1040 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 DYMQ7RTS9 669 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 RABGGTAQ92696 567 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 DDX12PQ92771 950 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 DDX27Q96GQ7 796 aaKnown RBP18.64■□□□□ 0.57
COMMD3-214ENST00000496071 SNX27Q96L92 541 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 ADAM7Q9H2U9 754 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 ST6GALNAC4Q9H4F1 302 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 FNIP2Q9P278 1114 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 SEL1LQ9UBV2 794 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 CFAP45Q9UL16 551 aa18.64■□□□□ 0.57
COMMD3-214ENST00000496071 TMEM189-UBE2V1I3L0A0 370 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 HNRNPDLO14979 420 aaKnown RBP18.63■□□□□ 0.57
COMMD3-214ENST00000496071 EPCAMP16422 314 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 GAP43P17677 238 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 CBX2Q14781 532 aaPredicted RBP18.63■□□□□ 0.57
COMMD3-214ENST00000496071 GLRA4Q5JXX5 417 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 PDXDC1Q6P996 788 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 KCNG4Q8TDN1 519 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 NECTIN4Q96NY8 510 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 FIZ1Q96SL8 496 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 C1QTNF1Q9BXJ1 281 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 PANK2Q9BZ23 570 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 LRRC27Q9C0I9 530 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 PLEKHA5Q9HAU0 1116 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 CNTN3Q9P232 1028 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 CACNG4Q9UBN1 327 aa18.63■□□□□ 0.57
COMMD3-214ENST00000496071 BDP1A6H8Y1 2624 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 MYMKA6NI61 221 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 PI4K2BG5E9Z4 385 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 TEX28O15482 410 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 TRAPPC3O43617 180 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 KIF4AO95239 1232 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 CLTAP09496 248 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 NMT1P30419 496 aaKnown RBP18.62■□□□□ 0.57
COMMD3-214ENST00000496071 MTHFRP42898 656 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 MAP4K3Q8IVH8 894 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 RIN2Q8WYP3 895 aaPredicted RBP18.62■□□□□ 0.57
COMMD3-214ENST00000496071 HVCN1Q96D96 273 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 DNAJC19Q96DA6 116 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 FBXL18Q96ME1 805 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 RIPOR3Q96MK2 946 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 TTPALQ9BTX7 342 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 APOL5Q9BWW9 433 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 CUEDC2Q9H467 287 aa18.62■□□□□ 0.57
COMMD3-214ENST00000496071 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.62■□□□□ 0.57
COMMD3-214ENST00000496071 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms