RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 SNTG2Q9NY99 539 aa13.01□□□□□ -0.33
APTX-233ENST00000496030 LRFN2Q9ULH4 789 aa13.01□□□□□ -0.33
APTX-233ENST00000496030 PLXNA3P51805 1871 aa13.01□□□□□ -0.33
APTX-233ENST00000496030 VPS13AQ96RL7 3174 aa13□□□□□ -0.33
APTX-233ENST00000496030 CLDN3O15551 220 aa13□□□□□ -0.33
APTX-233ENST00000496030 ITGA4P13612 1032 aa13□□□□□ -0.33
APTX-233ENST00000496030 BMP6P22004 513 aa13□□□□□ -0.33
APTX-233ENST00000496030 LTBRP36941 435 aa13□□□□□ -0.33
APTX-233ENST00000496030 GRM5P41594 1212 aa13□□□□□ -0.33
APTX-233ENST00000496030 LIG4P49917 911 aa13□□□□□ -0.33
APTX-233ENST00000496030 CAMK4Q16566 473 aa13□□□□□ -0.33
APTX-233ENST00000496030 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
APTX-233ENST00000496030 ZNF568Q3ZCX4 644 aa13□□□□□ -0.33
APTX-233ENST00000496030 SEZ6Q53EL9 994 aa13□□□□□ -0.33
APTX-233ENST00000496030 ZBTB41Q5SVQ8 909 aa13□□□□□ -0.33
APTX-233ENST00000496030 ALKAL1Q6UXT8 129 aa13□□□□□ -0.33
APTX-233ENST00000496030 RNF135Q8IUD6 432 aa13□□□□□ -0.33
APTX-233ENST00000496030 CMTR2Q8IYT2 770 aaKnown RBP13□□□□□ -0.33
APTX-233ENST00000496030 ZSWIM2Q8NEG5 633 aa13□□□□□ -0.33
APTX-233ENST00000496030 PGBD4Q96DM1 585 aa13□□□□□ -0.33
APTX-233ENST00000496030 CCDC34Q96HJ3 373 aa13□□□□□ -0.33
APTX-233ENST00000496030 ZFP42Q96MM3 310 aa13□□□□□ -0.33
APTX-233ENST00000496030 YME1L1Q96TA2 773 aa13□□□□□ -0.33
APTX-233ENST00000496030 TCHPQ9BT92 498 aa13□□□□□ -0.33
APTX-233ENST00000496030 CLSTN2Q9H4D0 955 aa13□□□□□ -0.33
APTX-233ENST00000496030 ANKFY1Q9P2R3 1169 aa13□□□□□ -0.33
APTX-233ENST00000496030 HCSTQ9UBK5 93 aa13□□□□□ -0.33
APTX-233ENST00000496030 GDAQ9Y2T3 454 aa13□□□□□ -0.33
APTX-233ENST00000496030 RIF1Q5UIP0 2472 aaKnown RBP13□□□□□ -0.33
APTX-233ENST00000496030 ARL5CA6NH57 179 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 TBKBP1A7MCY6 615 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 B4GALT3O60512 393 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 SMC2O95347 1197 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 DLX2Q07687 328 aaPredicted RBP12.99□□□□□ -0.33
APTX-233ENST00000496030 NOLC1Q14978 699 aaKnown RBP eCLIP12.99□□□□□ -0.33
APTX-233ENST00000496030 CLUL1Q15846 466 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
APTX-233ENST00000496030 XKR4Q5GH76 650 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 CRELD2Q6UXH1 353 aaPredicted RBP12.99□□□□□ -0.33
APTX-233ENST00000496030 STXBP4Q6ZWJ1 553 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 THNSL1Q8IYQ7 743 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 SMYD4Q8IYR2 804 aaPredicted RBP12.99□□□□□ -0.33
APTX-233ENST00000496030 CLP1Q92989 425 aaKnown RBP12.99□□□□□ -0.33
APTX-233ENST00000496030 SMARCE1Q969G3 411 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 BICD1Q96G01 975 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 GAD1Q99259 594 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 ADPGKQ9BRR6 497 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 APOL6Q9BWW8 343 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
APTX-233ENST00000496030 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 CWH43Q9H720 699 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 TMEM206Q9H813 350 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 RSAD1Q9HA92 442 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 TYW1Q9NV66 732 aaKnown RBP12.99□□□□□ -0.33
APTX-233ENST00000496030 KLK14Q9P0G3 267 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 MAN1B1Q9UKM7 699 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 PLAGL2Q9UPG8 496 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 EXOC7Q9UPT5 735 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 GIT1Q9Y2X7 761 aa12.99□□□□□ -0.33
APTX-233ENST00000496030 MRPL42Q9Y6G3 142 aaKnown RBP12.99□□□□□ -0.33
APTX-233ENST00000496030 UBE4BO95155 1302 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 WDR87Q6ZQQ6 2873 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 PTGESO14684 152 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 OGTO15294 1046 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 HOXA2O43364 376 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 RECQL4O94761 1208 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 ADRB2P07550 413 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 TNFSF9P41273 254 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 OSTNP61366 133 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 FOXK2Q01167 660 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 MORC3Q14149 939 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 BTG3Q14201 252 aaPredicted RBP12.98□□□□□ -0.33
APTX-233ENST00000496030 KNOP1Q1ED39 458 aaKnown RBP12.98□□□□□ -0.33
APTX-233ENST00000496030 SLC10A6Q3KNW5 377 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 EPC2Q52LR7 807 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 TIGD5Q53EQ6 642 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 NOMO2Q5JPE7 1267 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
APTX-233ENST00000496030 SLFN12LQ6IEE8 588 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 GLB1LQ6UWU2 654 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 BMP8AQ7Z5Y6 402 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 NELFCDQ8IXH7 590 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 SYCP3Q8IZU3 236 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 EDAQ92838 391 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 CBWD1Q9BRT8 395 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 MSTO1Q9BUK6 570 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 GBP3Q9H0R5 595 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 UBN1Q9NPG3 1134 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 CLDND1Q9NY35 253 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 HOOK1Q9UJC3 728 aaKnown RBP12.98□□□□□ -0.33
APTX-233ENST00000496030 MAPK8IP1Q9UQF2 711 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 FAM50BQ9Y247 325 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 CITO14578 2027 aa12.98□□□□□ -0.33
APTX-233ENST00000496030 DMDP11532 3685 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 FAM186AA6NE01 2351 aa12.97□□□□□ -0.33
APTX-233ENST00000496030 TMEM221A6NGB7 291 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms