RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 BADQ92934 168 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 CCDC127Q96BQ5 260 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 SCLT1Q96NL6 688 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 CHP1Q99653 195 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 TCHPQ9BT92 498 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 ADAMTS10Q9H324 1103 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 MINDY3Q9H8M7 445 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 NLRC4Q9NPP4 1024 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 XPNPEP3Q9NQH7 507 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 HDAC6Q9UBN7 1215 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 PPP2R2CQ9Y2T4 447 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 COQ4Q9Y3A0 265 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 MUC3AQ02505 3323 aa11.63□□□□□ -0.55
ECHDC3-204ENST00000495787 CNTNAP2Q9UHC6 1331 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 USP27XA6NNY8 438 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 TREHO43280 583 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 B4GALT5O43286 388 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 FAM189A1O60320 539 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 CCDC175P0C221 793 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 IQCF3P0C7M6 154 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 COL9A1P20849 921 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 RFX1P22670 979 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 CYLC1P35663 651 aaPredicted RBP11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 ACOT2P49753 483 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 APBA1Q02410 837 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 HIC1Q14526 733 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 MTF1Q14872 753 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 PCBP1Q15365 356 aaKnown RBP eCLIP11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 SURF1Q15526 300 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 TMEM132AQ24JP5 1023 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 TRIM60Q495X7 471 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 IQCEQ6IPM2 695 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 RUFY4Q6ZNE9 571 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 TOGARAM2Q6ZUX3 1019 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 ZBTB33Q86T24 672 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 BRSK2Q8IWQ3 736 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 CCDC170Q8IYT3 715 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 NME8Q8N427 588 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 PCSK9Q8NBP7 692 aaKnown RBP11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 VTI1AQ96AJ9 217 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 PPP1R13BQ96KQ4 1090 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 SPAG5Q96R06 1193 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 FNBP1Q96RU3 617 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 PPP1R16BQ96T49 567 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 GCOM2Q9BZD3 368 aaPredicted RBP11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 FAM49AQ9H0Q0 323 aaPredicted RBP11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 TRMT1Q9NXH9 659 aaKnown RBP11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 RBAKQ9NYW8 714 aaPredicted RBP11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 AIPL1Q9NZN9 384 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 FHOD1Q9Y613 1164 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 EPN1Q9Y6I3 576 aaPredicted RBP11.62□□□□□ -0.55
ECHDC3-204ENST00000495787 ANK1P16157 1881 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 SSU72P8A0A1W2PR75 194 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 GOLGA6L9A6NEM1 432 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 TNFRSF10AO00220 468 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 GPR32O75388 356 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 NDUFA10O95299 355 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 DLATP10515 647 aaKnown RBP11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 MCF2P10911 925 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 HARSP12081 509 aaKnown RBP11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 AP3M2P53677 418 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 JAM2P57087 298 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 POU5F1Q01860 360 aaKnown RBP11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 MAPK8IP2Q13387 824 aaPredicted RBP11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 RAPGEF1Q13905 1077 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 KYAT1Q16773 422 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 NBPF20Q3BBV1 942 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 ZNF568Q3ZCX4 644 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 ZBTB41Q5SVQ8 909 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 C1orf53Q5VUE5 145 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 EEF1DP3Q658K8 133 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 CCSAPQ6IQ19 270 aaPredicted RBP11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 TAF2Q6P1X5 1199 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 CXCL17Q6UXB2 119 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 C15orf39Q6ZRI6 1047 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 FMNL3Q8IVF7 1028 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 REXO1L1PQ8IX06 675 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 PPP1R13LQ8WUF5 828 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 DNAJB3Q8WWF6 145 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 POP1Q99575 1024 aaKnown RBP11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 CGRRF1Q99675 332 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 STK33Q9BYT3 514 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 CDT1Q9H211 546 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 APEX2Q9UBZ4 518 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 DNAJC12Q9UKB3 198 aa11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 CPSF3Q9UKF6 684 aaKnown RBP11.61□□□□□ -0.55
ECHDC3-204ENST00000495787 EIF3CLB5ME19 914 aaKnown RBP11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 KIF2AO00139 706 aaPredicted RBP11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 TSPAN1O60635 241 aa11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 CABYRO75952 493 aa11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 ERLIN2O94905 339 aa11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 TUBB4AP04350 444 aa11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 SERPING1P05155 500 aa11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 ASGR1P07306 291 aa11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 DARSP14868 501 aaKnown RBP11.6□□□□□ -0.55
ECHDC3-204ENST00000495787 ARF4P18085 180 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms