RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 IL18RAPO95256 599 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 AMHP03971 560 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 KRT13P13646 458 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 EEF1GP26641 437 aaKnown RBP21.15■□□□□ 0.98
ATG3-208ENST00000495756 WNT7BP56706 349 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 TPM4P67936 248 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 KCNJ12Q14500 433 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 PSMD6Q15008 389 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 ALKAL1Q6UXT8 129 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 NPAS4Q8IUM7 802 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 HERVK_113Q902F9 699 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 CCDC127Q96BQ5 260 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 FAM212AQ96EL1 285 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 SNX27Q96L92 541 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 PDE11AQ9HCR9 933 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 KLK14Q9P0G3 267 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 LRFN2Q9ULH4 789 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 RANBP2P49792 3224 aaKnown RBP21.15■□□□□ 0.98
ATG3-208ENST00000495756 PDE4DIPQ5VU43 2346 aa21.15■□□□□ 0.98
ATG3-208ENST00000495756 LACTBL1A8MY62 500 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 H0YGN5 161 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 KCNJ6P48051 423 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 MCCD1P59942 119 aaPredicted RBP21.14■□□□□ 0.98
ATG3-208ENST00000495756 DEFB103AP81534 67 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 PPP2R3AQ06190 1150 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 BFSP1Q12934 665 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 XKR4Q5GH76 650 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 TCP11X2Q5H9J9 407 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 CREBRFQ8IUR6 639 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 CD302Q8IX05 232 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 PLEKHO2Q8TD55 490 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 PARD3BQ8TEW8 1205 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 CXCL16Q9H2A7 254 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 RSAD1Q9HA92 442 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 ANK1P16157 1881 aa21.14■□□□□ 0.98
ATG3-208ENST00000495756 LAMA2P24043 3122 aaKnown RBP21.14■□□□□ 0.97
ATG3-208ENST00000495756 RALGAPA2Q2PPJ7 1873 aa21.14■□□□□ 0.97
ATG3-208ENST00000495756 ARL5CA6NH57 179 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 ZBBXA8MT70 800 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 TULP1O00294 542 aaPredicted RBP21.13■□□□□ 0.97
ATG3-208ENST00000495756 ATP1A3P13637 1013 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 VAMP7P51809 220 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 ENPEPQ07075 957 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 SPAG1Q07617 926 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 SURF1Q15526 300 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 TRIM59Q8IWR1 403 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 TMC2Q8TDI7 906 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 TOP1MTQ969P6 601 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 ZFP42Q96MM3 310 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 GAD1Q99259 594 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 ASB7Q9H672 318 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 RNF19AQ9NV58 838 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 CXXC1Q9P0U4 656 aaPredicted RBP21.13■□□□□ 0.97
ATG3-208ENST00000495756 CNTN3Q9P232 1028 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 TRIP11Q15643 1979 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 OFD1O75665 1012 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 DLATP10515 647 aaKnown RBP21.13■□□□□ 0.97
ATG3-208ENST00000495756 FGFR1P11362 822 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 CDK11BP21127 795 aaKnown RBP21.13■□□□□ 0.97
ATG3-208ENST00000495756 MLH1P40692 756 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 MTIF2P46199 727 aaKnown RBP21.13■□□□□ 0.97
ATG3-208ENST00000495756 DLG4P78352 724 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 CLLU1OSQ5K130 101 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 GLB1LQ6UWU2 654 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 USP37Q86T82 979 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 FNBP1Q96RU3 617 aa21.13■□□□□ 0.97
ATG3-208ENST00000495756 LRRIQ3A6PVS8 624 aaPredicted RBP21.12■□□□□ 0.97
ATG3-208ENST00000495756 INPPL1O15357 1258 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 HOXA2O43364 376 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 UPP2O95045 317 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 TRIM49P0CI25 452 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 TRIM49CP0CI26 452 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 KCNE1P15382 129 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 AFF1P51825 1210 aaKnown RBP21.12■□□□□ 0.97
ATG3-208ENST00000495756 CLDN10P78369 228 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 DCAF17Q5H9S7 520 aaPredicted RBP21.12■□□□□ 0.97
ATG3-208ENST00000495756 C1orf220Q5T0J3 134 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 GSTCDQ8NEC7 633 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 HELQQ8TDG4 1101 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 SLC35C1Q96A29 364 aa21.12■□□□□ 0.97
ATG3-208ENST00000495756 POP1Q99575 1024 aaKnown RBP21.12■□□□□ 0.97
ATG3-208ENST00000495756 MTIF3Q9H2K0 278 aaKnown RBP21.12■□□□□ 0.97
ATG3-208ENST00000495756 PTPRJQ12913 1337 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 SMIM28A0A1B0GU29 152 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 PTGESO14684 152 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 MLLT1Q03111 559 aaPredicted RBP21.11■□□□□ 0.97
ATG3-208ENST00000495756 KRT31Q15323 416 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 RASIP1Q5U651 963 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 TCERG1LQ5VWI1 586 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 JADE1Q6IE81 842 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 ANKRD20A12PQ8NF67 263 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 ZMAT2Q96NC0 199 aaKnown RBP21.11■□□□□ 0.97
ATG3-208ENST00000495756 RPS6KC1Q96S38 1066 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 CGRRF1Q99675 332 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 GDF15Q99988 308 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 TUBGCP2Q9BSJ2 902 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 LIMA1Q9UHB6 759 aaKnown RBP21.11■□□□□ 0.97
ATG3-208ENST00000495756 DERAQ9Y315 318 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 C2CD2Q9Y426 696 aa21.11■□□□□ 0.97
ATG3-208ENST00000495756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms