RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 RHOBTB2Q9BYZ6 727 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 MAN1C1Q9NR34 630 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 TSHZ2Q9NRE2 1034 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.92□□□□□ -1.14
VPS52-221ENST00000495755 BLOC1S4Q9NUP1 217 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 DPP7Q9UHL4 492 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 HCN4Q9Y3Q4 1203 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 SF3B1O75533 1304 aaKnown RBP eCLIP7.92□□□□□ -1.14
VPS52-221ENST00000495755 TECTAO75443 2155 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 CCDC195A0A1B0GUA6 201 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 VPS37CA5D8V6 355 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 TMEM221A6NGB7 291 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 TMEM189-UBE2V1I3L0A0 370 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 M0R296 226 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 MEFVO15553 781 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 TGM5O43548 720 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 TOM1L1O75674 476 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 GLUD1P00367 558 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 SPATA31D3P0C874 917 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 KCNE1P15382 129 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 RPL17P18621 184 aaKnown RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 FGFR3P22607 806 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 SP100P23497 879 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 PLA2G5P39877 138 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 CLCNKBP51801 687 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 ZNF131P52739 623 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 SMTNP53814 917 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 NCKAP1LP55160 1127 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 CREMQ03060 361 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 SOX4Q06945 474 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 ELAVL2Q12926 359 aaKnown RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 RESTQ13127 1097 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 UPP1Q16831 310 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 ZNF568Q3ZCX4 644 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 GLRA4Q5JXX5 417 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 RTP2Q5QGT7 225 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 FAM171A1Q5VUB5 890 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 ELMSAN1Q6PJG2 1045 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 DCLRE1AQ6PJP8 1040 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 PRSS55Q6UWB4 352 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 MPZL3Q6UWV2 235 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 ZPBP2Q6X784 338 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 SPATA31D4Q6ZUB0 917 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 ZBTB33Q86T24 672 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 PALB2Q86YC2 1186 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 PLCD3Q8N3E9 789 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 HASPINQ8TF76 798 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 PIK3R5Q8WYR1 880 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 ZNF707Q96C28 371 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 ASIC4Q96FT7 647 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 CALML4Q96GE6 196 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 ZBTB45Q96K62 511 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 MFSD14AQ96MC6 490 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 UROC1Q96N76 676 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 ZMAT2Q96NC0 199 aaKnown RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 CLSTN3Q9BQT9 956 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 TCHPQ9BT92 498 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 TTPALQ9BTX7 342 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 CCDC94Q9BW85 323 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 CCSER1Q9C0I3 900 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 PLEKHA4Q9H4M7 779 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 TOPORSQ9NS56 1045 aaPredicted RBP7.91□□□□□ -1.14
VPS52-221ENST00000495755 CLIC4Q9Y696 253 aa7.91□□□□□ -1.14
VPS52-221ENST00000495755 H0YCG3 227 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 RFPL2O75678 378 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 B3GAT3O94766 335 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 PLCG1P19174 1290 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 SCP2P22307 547 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 DDIT3P35638 169 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 YARSP54577 528 aaKnown RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 OSTNP61366 133 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 CACNB1Q02641 598 aaPredicted RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 MCL1Q07820 350 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 SIGLEC14Q08ET2 396 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 STRN3Q13033 797 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 MCM6Q14566 821 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 KARSQ15046 597 aaKnown RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 SLC10A6Q3KNW5 377 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 FAM173BQ6P4H8 233 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 PDXDC1Q6P996 788 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 USP49Q70CQ1 688 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 OTOP3Q7RTS5 596 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 HAUS6Q7Z4H7 955 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 GPBP1Q86WP2 473 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 TDRD5Q8NAT2 981 aaKnown RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 KREMEN2Q8NCW0 462 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 C3orf58Q8NDZ4 430 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 RAD54LQ92698 747 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 PBXIP1Q96AQ6 731 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 DDX27Q96GQ7 796 aaKnown RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 EPSTI1Q96J88 318 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 SNX27Q96L92 541 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 ACAP3Q96P50 834 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 REEP2Q9BRK0 252 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 HAPLN2Q9GZV7 340 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 GOLGA2P5Q9HBQ8 144 aa7.9□□□□□ -1.14
VPS52-221ENST00000495755 WDR6Q9NNW5 1121 aaKnown RBP7.9□□□□□ -1.14
VPS52-221ENST00000495755 SLC38A7Q9NVC3 462 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms