RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CHST7Q9NS84 486 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 MTMR6Q9Y217 621 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 TECTAO75443 2155 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 CARNS1A5YM72 827 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 I3L4J1 428 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 NR1I2O75469 434 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 RFPL2O75678 378 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 UBA7P41226 1012 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 CLCNKBP51801 687 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 HERC4Q5GLZ8 1057 aaPredicted RBP11.65□□□□□ -0.54
NELFE-213ENST00000494956 KIAA1841Q6NSI8 718 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 CES5AQ6NT32 575 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 CD300LGQ6UXG3 332 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 C3orf58Q8NDZ4 430 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 CALML4Q96GE6 196 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 ZMAT2Q96NC0 199 aaKnown RBP11.65□□□□□ -0.54
NELFE-213ENST00000494956 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.54
NELFE-213ENST00000494956 USP28Q96RU2 1077 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 TCHPQ9BT92 498 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 MRPL4Q9BYD3 311 aaKnown RBP11.65□□□□□ -0.54
NELFE-213ENST00000494956 SMOC2Q9H3U7 446 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 MAN1C1Q9NR34 630 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 ANKFY1Q9P2R3 1169 aa11.65□□□□□ -0.54
NELFE-213ENST00000494956 FBXO2Q9UK22 296 aaPredicted RBP11.65□□□□□ -0.54
NELFE-213ENST00000494956 SMIM28A0A1B0GU29 152 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 ADAM12O43184 909 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 MAPTP10636 758 aaKnown RBP11.64□□□□□ -0.55
NELFE-213ENST00000494956 PROZP22891 400 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 LONP1P36776 959 aaKnown RBP11.64□□□□□ -0.55
NELFE-213ENST00000494956 GRM5P41594 1212 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 BRCC3P46736 316 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 ITIH3Q06033 890 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 SPAG1Q07617 926 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 USP41Q3LFD5 358 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 FAM171A1Q5VUB5 890 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 HFE2Q6ZVN8 426 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 SPRYD3Q8NCJ5 442 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 RASSF8Q8NHQ8 419 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 RAD54LQ92698 747 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 C18orf25Q96B23 403 aaPredicted RBP11.64□□□□□ -0.55
NELFE-213ENST00000494956 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
NELFE-213ENST00000494956 IKZF4Q9H2S9 585 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 ZHX3Q9H4I2 956 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 RXFP1Q9HBX9 757 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 DZANK1Q9NVP4 752 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 ZMYM2Q9UBW7 1377 aa11.64□□□□□ -0.55
NELFE-213ENST00000494956 PRR33A8MZF0 331 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 TGM5O43548 720 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 STX6O43752 255 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 BMP15O95972 392 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 GLUD1P00367 558 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 ASGR2P07307 311 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 ADH1AP07327 375 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 PDCP20941 246 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 NMT1P30419 496 aaKnown RBP11.63□□□□□ -0.55
NELFE-213ENST00000494956 TNFSF9P41273 254 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 NCKAP1LP55160 1127 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 ZXDAP98168 799 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 STRN3Q13033 797 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 FOXD4L6Q3SYB3 417 aaPredicted RBP11.63□□□□□ -0.55
NELFE-213ENST00000494956 ZBTB41Q5SVQ8 909 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 MPZL3Q6UWV2 235 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 ALKAL1Q6UXT8 129 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 FOXD4L3Q6VB84 417 aaPredicted RBP11.63□□□□□ -0.55
NELFE-213ENST00000494956 DYMQ7RTS9 669 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 GPR149Q86SP6 731 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 PPFIBP1Q86W92 1011 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 MYCT1Q8N699 235 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 ST13P5Q8NFI4 369 aaPredicted RBP11.63□□□□□ -0.55
NELFE-213ENST00000494956 SPIRE2Q8WWL2 714 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 LARP4BQ92615 738 aaKnown RBP11.63□□□□□ -0.55
NELFE-213ENST00000494956 INTS4Q96HW7 963 aaKnown RBP11.63□□□□□ -0.55
NELFE-213ENST00000494956 SNX27Q96L92 541 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 AK8Q96MA6 479 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 TIPINQ9BVW5 301 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 CCDC94Q9BW85 323 aaPredicted RBP11.63□□□□□ -0.55
NELFE-213ENST00000494956 PANK2Q9BZ23 570 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 SFXN1Q9H9B4 322 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 C17orf75Q9HAS0 396 aa11.63□□□□□ -0.55
NELFE-213ENST00000494956 RBM19Q9Y4C8 960 aaKnown RBP11.63□□□□□ -0.55
NELFE-213ENST00000494956 SF3B1O75533 1304 aaKnown RBP eCLIP11.62□□□□□ -0.55
NELFE-213ENST00000494956 ANK1P16157 1881 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 A0A087X0B3 334 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 CCDC195A0A1B0GUA6 201 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 TISP43B9A030 160 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 K7ENM7 598 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 B3GAT3O94766 335 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 FAM13AO94988 1023 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 KRT18P05783 430 aaKnown RBP11.62□□□□□ -0.55
NELFE-213ENST00000494956 CXCL8P10145 99 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 MCF2P10911 925 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 TKTP29401 623 aaKnown RBP11.62□□□□□ -0.55
NELFE-213ENST00000494956 MTHFRP42898 656 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 MATR3P43243 847 aaKnown RBP eCLIP11.62□□□□□ -0.55
NELFE-213ENST00000494956 YARSP54577 528 aaKnown RBP11.62□□□□□ -0.55
NELFE-213ENST00000494956 NOLC1Q14978 699 aaKnown RBP eCLIP11.62□□□□□ -0.55
NELFE-213ENST00000494956 PSMD5Q16401 504 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 UPP1Q16831 310 aa11.62□□□□□ -0.55
NELFE-213ENST00000494956 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms