RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 HIP1RO75146 1068 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 RFPL2O75678 378 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 EDN1P05305 212 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 YARSP54577 528 aaKnown RBP20.17■□□□□ 0.82
SNX8-209ENST00000494722 VCPP55072 806 aaKnown RBP20.17■□□□□ 0.82
SNX8-209ENST00000494722 ATP2C1P98194 919 aaPredicted RBP20.17■□□□□ 0.82
SNX8-209ENST00000494722 RTP2Q5QGT7 225 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 NXPE3Q969Y0 559 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 CCDC94Q9BW85 323 aaPredicted RBP20.17■□□□□ 0.82
SNX8-209ENST00000494722 PRKD2Q9BZL6 878 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 KCNK12Q9HB15 430 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 USP20Q9Y2K6 914 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 CITO14578 2027 aa20.17■□□□□ 0.82
SNX8-209ENST00000494722 DOCK8Q8NF50 2099 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 TRAPPC3O43617 180 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 SPATA31D3P0C874 917 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 GBP2P32456 591 aaPredicted RBP20.16■□□□□ 0.82
SNX8-209ENST00000494722 PSMD5Q16401 504 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 IL17AQ16552 155 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 RINT1Q6NUQ1 792 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 DCLRE1AQ6PJP8 1040 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.16■□□□□ 0.82
SNX8-209ENST00000494722 SPATA31D4Q6ZUB0 917 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 C1orf186Q6ZWK4 172 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 CEP57Q86XR8 500 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 HASPINQ8TF76 798 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 ZNF707Q96C28 371 aaPredicted RBP20.16■□□□□ 0.82
SNX8-209ENST00000494722 ACO2Q99798 780 aaKnown RBP20.16■□□□□ 0.82
SNX8-209ENST00000494722 MFSD1Q9H3U5 465 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 POLD4Q9HCU8 107 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNX8-209ENST00000494722 KCND2Q9NZV8 630 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 ARHGAP28Q9P2N2 729 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 EPS15L1Q9UBC2 864 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 CACNG4Q9UBN1 327 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 DUSP12Q9UNI6 340 aa20.16■□□□□ 0.82
SNX8-209ENST00000494722 VWA8A3KMH1 1905 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 PP2D1A8MPX8 630 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 ZMYND10O75800 440 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 RPL17P18621 184 aaKnown RBP20.15■□□□□ 0.82
SNX8-209ENST00000494722 GUCY2CP25092 1073 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 GJB2P29033 226 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 GRM5P41594 1212 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 TCF15Q12870 199 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 ZNF568Q3ZCX4 644 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 HYIQ5T013 277 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 LIN9Q5TKA1 542 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 ARL6IP4Q66PJ3 421 aaKnown RBP20.15■□□□□ 0.82
SNX8-209ENST00000494722 PRSS55Q6UWB4 352 aaPredicted RBP20.15■□□□□ 0.82
SNX8-209ENST00000494722 GLYCTKQ8IVS8 523 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 DAW1Q8N136 415 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 LNX1Q8TBB1 728 aaPredicted RBP20.15■□□□□ 0.82
SNX8-209ENST00000494722 FEZF2Q8TBJ5 459 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 DDX27Q96GQ7 796 aaKnown RBP20.15■□□□□ 0.82
SNX8-209ENST00000494722 CDK5RAP3Q96JB5 506 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 PPP1R10Q96QC0 940 aaKnown RBP20.15■□□□□ 0.82
SNX8-209ENST00000494722 NTPCRQ9BSD7 190 aaKnown RBP20.15■□□□□ 0.82
SNX8-209ENST00000494722 MMTAG2Q9BU76 263 aaKnown RBP20.15■□□□□ 0.82
SNX8-209ENST00000494722 SLC38A7Q9NVC3 462 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 FBXW11Q9UKB1 542 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 CACNA1HO95180 2353 aa20.15■□□□□ 0.82
SNX8-209ENST00000494722 SLC26A4O43511 780 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 B3GAT3O94766 335 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 PDGFBP01127 241 aaPredicted RBP20.14■□□□□ 0.81
SNX8-209ENST00000494722 HNRNPA1P09651 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
SNX8-209ENST00000494722 MCF2P10911 925 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 CDC25AP30304 524 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 CLCN5P51795 746 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 SMTNP53814 917 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 RTL10Q7L3V2 364 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 SPIRE2Q8WWL2 714 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 CLSTN3Q9BQT9 956 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 RUSC1Q9BVN2 902 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 CDT1Q9H211 546 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 SMOC2Q9H3U7 446 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 PTPRHQ9HD43 1115 aa20.14■□□□□ 0.81
SNX8-209ENST00000494722 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.14■□□□□ 0.81
SNX8-209ENST00000494722 ZFP37Q9Y6Q3 630 aaPredicted RBP20.14■□□□□ 0.81
SNX8-209ENST00000494722 MYBP10242 640 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 FGFR3P22607 806 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 HOXA9P31269 272 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 STRN3Q13033 797 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 MAPK7Q13164 816 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 ZRSR1Q15695 479 aaKnown RBP20.13■□□□□ 0.81
SNX8-209ENST00000494722 UPP1Q16831 310 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 GLRA4Q5JXX5 417 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 ASTLQ6HA08 431 aaPredicted RBP20.13■□□□□ 0.81
SNX8-209ENST00000494722 MPZL3Q6UWV2 235 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 SYT2Q8N9I0 419 aaPredicted RBP20.13■□□□□ 0.81
SNX8-209ENST00000494722 AK8Q96MA6 479 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 ACAP3Q96P50 834 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 TCHPQ9BT92 498 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 SMC3Q9UQE7 1217 aa20.13■□□□□ 0.81
SNX8-209ENST00000494722 SMIM28A0A1B0GU29 152 aa20.12■□□□□ 0.81
SNX8-209ENST00000494722 VWA3AA6NCI4 1184 aa20.12■□□□□ 0.81
SNX8-209ENST00000494722 H0YCG3 227 aa20.12■□□□□ 0.81
SNX8-209ENST00000494722 GALR2O43603 387 aaPredicted RBP20.12■□□□□ 0.81
SNX8-209ENST00000494722 PLS3P13797 630 aa20.12■□□□□ 0.81
SNX8-209ENST00000494722 CLCNKBP51801 687 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms