RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 USP41Q3LFD5 358 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 KANK3Q6NY19 840 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 FBXL18Q96ME1 805 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 SF3B1O75533 1304 aaKnown RBP eCLIP36.38■■■■□ 3.412e-6■■■■■ 30
CBX4-203ENST00000494546 ABLIM1O14639 778 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 TEX28O15482 410 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 TOM1L1O75674 476 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 ADH1AP07327 375 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 TXLNAP40222 546 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 SLC39A14Q15043 492 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 HAUS6Q7Z4H7 955 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 RNF135Q8IUD6 432 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 PPP1R10Q96QC0 940 aaKnown RBP36.38■■■■□ 3.41
CBX4-203ENST00000494546 PARVGQ9HBI0 331 aa36.38■■■■□ 3.41
CBX4-203ENST00000494546 LOC730098B7Z3J9 87 aa36.37■■■■□ 3.41
CBX4-203ENST00000494546 DCXO43602 365 aa36.37■■■■□ 3.41
CBX4-203ENST00000494546 TBCAO75347 108 aaKnown RBP36.37■■■■□ 3.41
CBX4-203ENST00000494546 WEE2P0C1S8 567 aa36.37■■■■□ 3.41
CBX4-203ENST00000494546 FOXD4L5Q5VV16 416 aaPredicted RBP36.37■■■■□ 3.41
CBX4-203ENST00000494546 FOXD4L4Q8WXT5 416 aaPredicted RBP36.37■■■■□ 3.41
CBX4-203ENST00000494546 RIN2Q8WYP3 895 aaPredicted RBP36.37■■■■□ 3.41
CBX4-203ENST00000494546 BICD1Q96G01 975 aa36.37■■■■□ 3.41
CBX4-203ENST00000494546 ACAP3Q96P50 834 aa36.37■■■■□ 3.41
CBX4-203ENST00000494546 RXFP1Q9HBX9 757 aa36.37■■■■□ 3.41
CBX4-203ENST00000494546 K7ENM7 598 aa36.36■■■■□ 3.41
CBX4-203ENST00000494546 BRD1O95696 1058 aa36.36■■■■□ 3.41
CBX4-203ENST00000494546 MATR3P43243 847 aaKnown RBP eCLIP36.36■■■■□ 3.41
CBX4-203ENST00000494546 ZNF131P52739 623 aa36.36■■■■□ 3.41
CBX4-203ENST00000494546 ZPBP2Q6X784 338 aa36.36■■■■□ 3.41
CBX4-203ENST00000494546 KRI1Q8N9T8 703 aaKnown RBP36.36■■■■□ 3.41
CBX4-203ENST00000494546 SMIM28A0A1B0GU29 152 aa36.35■■■■□ 3.41
CBX4-203ENST00000494546 FAM86C2PA6NEL3 165 aa36.35■■■■□ 3.41
CBX4-203ENST00000494546 SP100P23497 879 aaPredicted RBP36.35■■■■□ 3.41
CBX4-203ENST00000494546 NOLC1Q14978 699 aaKnown RBP eCLIP36.35■■■■□ 3.41
CBX4-203ENST00000494546 TMEM31Q5JXX7 168 aa36.35■■■■□ 3.41
CBX4-203ENST00000494546 RRAGBQ5VZM2 374 aa36.35■■■■□ 3.41
CBX4-203ENST00000494546 TMC5Q6UXY8 1006 aa36.35■■■■□ 3.41
CBX4-203ENST00000494546 STK17AQ9UEE5 414 aa36.35■■■■□ 3.41
CBX4-203ENST00000494546 MUTYHQ9UIF7 546 aa36.35■■■■□ 3.41
CBX4-203ENST00000494546 TRAK2O60296 914 aa36.34■■■■□ 3.41
CBX4-203ENST00000494546 STK38Q15208 465 aa36.34■■■■□ 3.41
CBX4-203ENST00000494546 RIPOR3Q96MK2 946 aa36.34■■■■□ 3.41
CBX4-203ENST00000494546 NECTIN4Q96NY8 510 aa36.34■■■■□ 3.41
CBX4-203ENST00000494546 SFXN1Q9H9B4 322 aa36.34■■■■□ 3.41
CBX4-203ENST00000494546 MORC2Q9Y6X9 1032 aaPredicted RBP36.34■■■■□ 3.41
CBX4-203ENST00000494546 CLDN3O15551 220 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 MTHFRP42898 656 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 NASPP49321 788 aaPredicted RBP36.33■■■■□ 3.41
CBX4-203ENST00000494546 SEZ6Q53EL9 994 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 FAM171A1Q5VUB5 890 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 ALKAL1Q6UXT8 129 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 CEP57Q86XR8 500 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 GLYCTKQ8IVS8 523 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 SNX27Q96L92 541 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 POMKQ9H5K3 350 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 GOLGA2P5Q9HBQ8 144 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 TSHZ2Q9NRE2 1034 aa36.33■■■■□ 3.41
CBX4-203ENST00000494546 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP36.33■■■■□ 3.41
CBX4-203ENST00000494546 TFIP11Q9UBB9 837 aaKnown RBP36.33■■■■□ 3.41
CBX4-203ENST00000494546 GLUD1P00367 558 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 CLCNKBP51801 687 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 XKR4Q5GH76 650 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 RTP2Q5QGT7 225 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 ATAT1Q5SQI0 421 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 PRSS55Q6UWB4 352 aaPredicted RBP36.32■■■■□ 3.4
CBX4-203ENST00000494546 GPR65Q8IYL9 337 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 SPRYD3Q8NCJ5 442 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 ZNF396Q96N95 335 aaPredicted RBP36.32■■■■□ 3.4
CBX4-203ENST00000494546 TTPALQ9BTX7 342 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 C11orf16Q9NQ32 467 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 MAN1C1Q9NR34 630 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 TBX20Q9UMR3 447 aa36.32■■■■□ 3.4
CBX4-203ENST00000494546 B3GAT3O94766 335 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 MYBP10242 640 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 RPL17P18621 184 aaKnown RBP36.31■■■■□ 3.4
CBX4-203ENST00000494546 LIG4P49917 911 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 MCL1Q07820 350 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 ELAVL2Q12926 359 aaKnown RBP36.31■■■■□ 3.4
CBX4-203ENST00000494546 DYMQ7RTS9 669 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 PALB2Q86YC2 1186 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 UROC1Q96N76 676 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 ZMAT2Q96NC0 199 aaKnown RBP36.31■■■■□ 3.4
CBX4-203ENST00000494546 LRFN3Q9BTN0 628 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 PANK2Q9BZ23 570 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 SLC38A7Q9NVC3 462 aa36.31■■■■□ 3.4
CBX4-203ENST00000494546 GPR37L1O60883 481 aa36.3■■■■□ 3.4
CBX4-203ENST00000494546 IGFBP6P24592 240 aaPredicted RBP36.3■■■■□ 3.4
CBX4-203ENST00000494546 SOX4Q06945 474 aaPredicted RBP36.3■■■■□ 3.4
CBX4-203ENST00000494546 DCLRE1AQ6PJP8 1040 aa36.3■■■■□ 3.4
CBX4-203ENST00000494546 LINC00301Q8NCQ3 95 aa36.3■■■■□ 3.4
CBX4-203ENST00000494546 FEZF2Q8TBJ5 459 aa36.3■■■■□ 3.4
CBX4-203ENST00000494546 KCNN1Q92952 543 aa36.3■■■■□ 3.4
CBX4-203ENST00000494546 FNIP2Q9P278 1114 aa36.3■■■■□ 3.4
CBX4-203ENST00000494546 HNRNPDLO14979 420 aaKnown RBP36.29■■■■□ 3.4
CBX4-203ENST00000494546 SCP2P22307 547 aa36.29■■■■□ 3.4
CBX4-203ENST00000494546 NMT1P30419 496 aaKnown RBP36.29■■■■□ 3.4
CBX4-203ENST00000494546 CREMQ03060 361 aa36.29■■■■□ 3.4
CBX4-203ENST00000494546 UPP1Q16831 310 aa36.29■■■■□ 3.4
CBX4-203ENST00000494546 HERC4Q5GLZ8 1057 aaPredicted RBP36.29■■■■□ 3.4
CBX4-203ENST00000494546 ELMSAN1Q6PJG2 1045 aa36.29■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms