RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 LUC7L3O95232 432 aaKnown RBP12.45□□□□□ -0.42
BRCA1-222ENST00000493919 MLH1P40692 756 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
BRCA1-222ENST00000493919 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 DPF3Q92784 378 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 C8orf48Q96LL4 319 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 GPR20Q99678 358 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 KCND1Q9NSA2 647 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 FKBP14Q9NWM8 211 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 CAPN7Q9Y6W3 813 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 CYP3A7-CYP3A51PA0A087WV96 503 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 A6NHS1 94 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 PQBP1O60828 265 aaKnown RBP12.44□□□□□ -0.42
BRCA1-222ENST00000493919 GAS7O60861 476 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 RPN1P04843 607 aaKnown RBP12.44□□□□□ -0.42
BRCA1-222ENST00000493919 LGALS2P05162 132 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 SYT1P21579 422 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 CYP3A7P24462 503 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 MCM7P33993 719 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 RGS19P49795 217 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 RTP1P59025 263 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 AMPD3Q01432 767 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-222ENST00000493919 TRIM60Q495X7 471 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 PPP4R3AQ6IN85 833 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 SLC39A5Q6ZMH5 540 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 C7orf61Q8IZ16 206 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 LSMEM2Q8N112 164 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 DEPTORQ8TB45 409 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 HELQQ8TDG4 1101 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 ABCG4Q9H172 646 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 KMT5AQ9NQR1 393 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 SAMM50Q9Y512 469 aa12.44□□□□□ -0.42
BRCA1-222ENST00000493919 C2orf81A6NN90 581 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 KPNA6O60684 536 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 SNX2O60749 519 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 S100A1P23297 94 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 ACTR2P61160 394 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
BRCA1-222ENST00000493919 MRPL28Q13084 256 aaKnown RBP12.43□□□□□ -0.42
BRCA1-222ENST00000493919 ITGA7Q13683 1181 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 LMBRD2Q68DH5 695 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-222ENST00000493919 ALKBH2Q6NS38 261 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 GRAMD2AQ8IUY3 354 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 MBOAT7Q96N66 472 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 UQCC2Q9BRT2 126 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 TEKT3Q9BXF9 490 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 DNAI2Q9GZS0 605 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 TBC1D22BQ9NU19 505 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 R3HDM2Q9Y2K5 976 aaKnown RBP12.43□□□□□ -0.42
BRCA1-222ENST00000493919 TMA7Q9Y2S6 64 aaKnown RBP12.43□□□□□ -0.42
BRCA1-222ENST00000493919 SCN10AQ9Y5Y9 1956 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 LRRIQ3A6PVS8 624 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-222ENST00000493919 ZNF254O75437 659 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 STAMBPO95630 424 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 CCNE2O96020 404 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 F2P00734 622 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 MARK3P27448 753 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 LBRQ14739 615 aaKnown RBP12.43□□□□□ -0.42
BRCA1-222ENST00000493919 CALCRLQ16602 461 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 WHAMMP3Q1A5X7 153 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 ARHGAP29Q52LW3 1261 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 ETNPPLQ8TBG4 499 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 SEPT1Q8WYJ6 367 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 GLG1Q92896 1179 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 SLC5A5Q92911 643 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 SPACA7Q96KW9 195 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 KATNAL1Q9BW62 490 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 FUT8Q9BYC5 575 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 PCDHGB3Q9Y5G1 929 aa12.43□□□□□ -0.42
BRCA1-222ENST00000493919 PDE4DIPQ5VU43 2346 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 HTR3EA5X5Y0 456 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 H0YC42 278 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 ARVCFO00192 962 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 BACH1O14867 736 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 DHX15O43143 795 aaKnown RBP12.42□□□□□ -0.42
BRCA1-222ENST00000493919 MGRN1O60291 552 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 SMIM24O75264 130 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 RASSF9O75901 435 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 HOXD8P13378 290 aaPredicted RBP12.42□□□□□ -0.42
BRCA1-222ENST00000493919 TPD52P55327 224 aaPredicted RBP12.42□□□□□ -0.42
BRCA1-222ENST00000493919 KRT76Q01546 638 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 DRP2Q13474 957 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 LRP8Q14114 963 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 MFSD10Q14728 455 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 PTPN14Q15678 1187 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 ZNF174Q15697 407 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 NEPROQ6NW34 567 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 TMEM53Q6P2H8 277 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 NLRP9Q7RTR0 991 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 MAATS1Q7Z4T9 603 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 YTHDF3Q7Z739 585 aaKnown RBP12.42□□□□□ -0.42
BRCA1-222ENST00000493919 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
BRCA1-222ENST00000493919 SMC6Q96SB8 1091 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 ARFGAP3Q9NP61 516 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 KCNMB3Q9NPA1 279 aa12.42□□□□□ -0.42
BRCA1-222ENST00000493919 PRDM5Q9NQX1 630 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms