RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ANGPT2O15123 496 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 GUCY1A3Q02108 690 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 P3H1Q32P28 736 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 C16orf89Q6UX73 402 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 C4orf22Q6V702 233 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 SCN4BQ8IWT1 228 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 DDX50Q9BQ39 737 aaKnown RBP21.22■□□□□ 0.99
RNF40-203ENST00000493683 FAM167BQ9BTA0 163 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 CPDO75976 1380 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 USP42Q9H9J4 1324 aaKnown RBP21.22■□□□□ 0.99
RNF40-203ENST00000493683 RHOBTB3O94955 611 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 KLHL2O95198 593 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 SWSAP1Q6NVH7 229 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 C1orf228Q6PIY5 440 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 FARP1Q9Y4F1 1045 aaPredicted RBP21.22■□□□□ 0.99
RNF40-203ENST00000493683 BNIP3LO60238 219 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 EXOSC10Q01780 885 aaKnown RBP21.22■□□□□ 0.99
RNF40-203ENST00000493683 CCNI2Q6ZMN8 369 aaPredicted RBP21.22■□□□□ 0.99
RNF40-203ENST00000493683 KCNA2P16389 499 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 DDIASQ8IXT1 998 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 ELOA2Q8IYF1 753 aaPredicted RBP21.21■□□□□ 0.99
RNF40-203ENST00000493683 ACAD9Q9H845 621 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 HERC5Q9UII4 1024 aaKnown RBP21.21■□□□□ 0.99
RNF40-203ENST00000493683 CDV3Q9UKY7 258 aaKnown RBP21.21■□□□□ 0.99
RNF40-203ENST00000493683 A8MXQ7 604 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 TSSK1BQ9BXA7 367 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 PRR36Q9H6K5 1346 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 EDRF1Q3B7T1 1238 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 RBBP7Q16576 425 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 CCT8L2Q96SF2 557 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 PRMT1Q99873 361 aaKnown RBP21.21■□□□□ 0.99
RNF40-203ENST00000493683 SENP7Q9BQF6 1050 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 FAM217BQ9NTX9 383 aaPredicted RBP21.21■□□□□ 0.99
RNF40-203ENST00000493683 ZDHHC9Q9Y397 364 aa21.21■□□□□ 0.99
RNF40-203ENST00000493683 F5H6K3 240 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 CCND1P24385 295 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 RAP1GDS1P52306 607 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 KLRC3Q07444 240 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 CNGA3Q16281 694 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 PID1Q7Z2X4 250 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 SETD3Q86TU7 594 aaPredicted RBP21.2■□□□□ 0.98
RNF40-203ENST00000493683 ZNF555Q8NEP9 628 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 GANCQ8TET4 914 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 ZCCHC17Q9NP64 241 aaKnown RBP21.2■□□□□ 0.98
RNF40-203ENST00000493683 MTO1Q9Y2Z2 717 aaKnown RBP21.2■□□□□ 0.98
RNF40-203ENST00000493683 KIF28PB7ZC32 967 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 FGFR4P22455 802 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 PIGHQ14442 188 aaPredicted RBP21.2■□□□□ 0.98
RNF40-203ENST00000493683 KRT72Q14CN4 511 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 OR6P1Q8NGX9 317 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 ASIC4Q96FT7 647 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 PSMD14O00487 310 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 CCZ1BP86790 482 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 CCZ1P86791 482 aaPredicted RBP21.2■□□□□ 0.98
RNF40-203ENST00000493683 CCDC134Q9H6E4 229 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 FAM47DPA6NHR8 397 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 TDP2O95551 362 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 SZRD1Q7Z422 152 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 RUBCNLQ9H714 662 aa21.2■□□□□ 0.98
RNF40-203ENST00000493683 RALAP11233 206 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 FCER1AP12319 257 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 DPYDQ12882 1025 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 ISCA1Q9BUE6 129 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 MAGI3Q5TCQ9 1506 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 MMP10P09238 476 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 TRIM49P0CI25 452 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 TRIM49CP0CI26 452 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 CHN1P15882 459 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 DAB2IPQ5VWQ8 1189 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 RRM2BQ7LG56 351 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 PDCD6IPQ8WUM4 868 aaKnown RBP21.19■□□□□ 0.98
RNF40-203ENST00000493683 C18orf8Q96DM3 657 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 XPO6Q96QU8 1125 aaKnown RBP21.19■□□□□ 0.98
RNF40-203ENST00000493683 STX3Q13277 289 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 ZNF235Q14590 738 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 NAB2Q15742 525 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 HLFQ16534 295 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 ARHGEF26Q96DR7 871 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 PIM2Q9P1W9 311 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 SRP68Q9UHB9 627 aaKnown RBP21.19■□□□□ 0.98
RNF40-203ENST00000493683 RBM15Q96T37 977 aaKnown RBP eCLIP21.19■□□□□ 0.98
RNF40-203ENST00000493683 PHF20Q9BVI0 1012 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 MRPL1Q9BYD6 325 aaKnown RBP21.19■□□□□ 0.98
RNF40-203ENST00000493683 FRMD8Q9BZ67 464 aaPredicted RBP21.19■□□□□ 0.98
RNF40-203ENST00000493683 C3orf70A6NLC5 250 aaPredicted RBP21.19■□□□□ 0.98
RNF40-203ENST00000493683 NLRP11P59045 1033 aaKnown RBP21.19■□□□□ 0.98
RNF40-203ENST00000493683 KLC1Q07866 573 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 TRAPPC11Q7Z392 1133 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 TUBE1Q9UJT0 475 aa21.19■□□□□ 0.98
RNF40-203ENST00000493683 MED14O60244 1454 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 BTBD8Q5XKL5 378 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 RAB42Q8N4Z0 105 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 SYN2Q92777 582 aaPredicted RBP21.18■□□□□ 0.98
RNF40-203ENST00000493683 NR1I3Q14994 352 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 E4F1Q66K89 784 aaPredicted RBP21.18■□□□□ 0.98
RNF40-203ENST00000493683 SARS2Q9NP81 518 aaKnown RBP21.18■□□□□ 0.98
RNF40-203ENST00000493683 NMT2O60551 498 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 HSPA1AP0DMV8 641 aaKnown RBP21.18■□□□□ 0.98
RNF40-203ENST00000493683 HSPA1BP0DMV9 641 aaKnown RBP21.18■□□□□ 0.98
RNF40-203ENST00000493683 CEP55Q53EZ4 464 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms