RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 USP20Q9Y2K6 914 aa18.29■□□□□ 0.52
PTPRU-208ENST00000493601 PCDHB6Q9Y5E3 794 aa18.29■□□□□ 0.52
PTPRU-208ENST00000493601 H0Y858 1186 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 K7ERI5 159 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 ZMYND10O75800 440 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 PRPHP41219 470 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 TOB1P50616 345 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-208ENST00000493601 DMP1Q13316 513 aaPredicted RBP18.28■□□□□ 0.52
PTPRU-208ENST00000493601 NT5DC1Q5TFE4 455 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 LIN9Q5TKA1 542 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 NXPE3Q969Y0 559 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 DRC1Q96MC2 740 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 FBXW11Q9UKB1 542 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 TRIP11Q15643 1979 aa18.28■□□□□ 0.52
PTPRU-208ENST00000493601 CCDC169A6NNP5 214 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 TMEM189-UBE2V1I3L0A0 370 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 C8orf34Q49A92 452 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 CWF19L1Q69YN2 538 aaKnown RBP18.27■□□□□ 0.52
PTPRU-208ENST00000493601 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.27■□□□□ 0.52
PTPRU-208ENST00000493601 GET4Q7L5D6 327 aaPredicted RBP18.27■□□□□ 0.52
PTPRU-208ENST00000493601 SIX5Q8N196 739 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 FLCNQ8NFG4 579 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 LNX1Q8TBB1 728 aaPredicted RBP18.27■□□□□ 0.52
PTPRU-208ENST00000493601 UROC1Q96N76 676 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 MYADMQ96S97 322 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 CLSTN3Q9BQT9 956 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 CXCL16Q9H2A7 254 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 POLD4Q9HCU8 107 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 TOPORSQ9NS56 1045 aaPredicted RBP18.27■□□□□ 0.52
PTPRU-208ENST00000493601 TNFSF13BQ9Y275 285 aa18.27■□□□□ 0.52
PTPRU-208ENST00000493601 VPS13AQ96RL7 3174 aa18.27■□□□□ 0.51
PTPRU-208ENST00000493601 MYO15AQ9UKN7 3530 aa18.26■□□□□ 0.51
PTPRU-208ENST00000493601 HIP1RO75146 1068 aa18.26■□□□□ 0.51
PTPRU-208ENST00000493601 HNRNPA1P09651 372 aaKnown RBP eCLIP18.26■□□□□ 0.51
PTPRU-208ENST00000493601 NPTX2P47972 431 aa18.26■□□□□ 0.51
PTPRU-208ENST00000493601 YARSP54577 528 aaKnown RBP18.26■□□□□ 0.51
PTPRU-208ENST00000493601 PEX3P56589 373 aa18.26■□□□□ 0.51
PTPRU-208ENST00000493601 ZNF568Q3ZCX4 644 aa18.26■□□□□ 0.51
PTPRU-208ENST00000493601 GLRA4Q5JXX5 417 aa18.26■□□□□ 0.51
PTPRU-208ENST00000493601 DTHD1Q6ZMT9 781 aa18.26■□□□□ 0.51
PTPRU-208ENST00000493601 PPP1R10Q96QC0 940 aaKnown RBP18.26■□□□□ 0.51
PTPRU-208ENST00000493601 CCDC94Q9BW85 323 aaPredicted RBP18.26■□□□□ 0.51
PTPRU-208ENST00000493601 MRPL4Q9BYD3 311 aaKnown RBP18.26■□□□□ 0.51
PTPRU-208ENST00000493601 CITO14578 2027 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 MYH11P35749 1972 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 PP2D1A8MPX8 630 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 E9PMD0 336 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 NARSO43776 548 aaKnown RBP18.25■□□□□ 0.51
PTPRU-208ENST00000493601 ST18O60284 1047 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 B3GAT3O94766 335 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 AOC1P19801 751 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 HOXA9P31269 272 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 GRM5P41594 1212 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 RABEP1Q15276 862 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 PPM1LQ5SGD2 360 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 RSAD2Q8WXG1 361 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 ACO2Q99798 780 aaKnown RBP18.25■□□□□ 0.51
PTPRU-208ENST00000493601 TIPINQ9BVW5 301 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 TMEM134Q9H6X4 195 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 C17orf75Q9HAS0 396 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 KMT5AQ9NQR1 393 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 ARHGAP28Q9P2N2 729 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 WNT16Q9UBV4 365 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 RBM19Q9Y4C8 960 aaKnown RBP18.25■□□□□ 0.51
PTPRU-208ENST00000493601 ZFP37Q9Y6Q3 630 aaPredicted RBP18.25■□□□□ 0.51
PTPRU-208ENST00000493601 CFAP54Q96N23 3096 aa18.25■□□□□ 0.51
PTPRU-208ENST00000493601 TRAPPC3O43617 180 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 GFRA3O60609 400 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 XYLBO75191 536 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 C8AP07357 584 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 CFHP08603 1231 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 SRFP11831 508 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 LAMP2P13473 410 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 FGFR3P22607 806 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 FSHRP23945 695 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 CLCNKBP51801 687 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 UPP1Q16831 310 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 RILPL1Q5EBL4 403 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 MCTP1Q6DN14 999 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 DCLRE1AQ6PJP8 1040 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 DAW1Q8N136 415 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 SLC44A3Q8N4M1 653 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 RTP3Q9BQQ7 232 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 RUSC1Q9BVN2 902 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 CDT1Q9H211 546 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.24■□□□□ 0.51
PTPRU-208ENST00000493601 SLC38A7Q9NVC3 462 aa18.24■□□□□ 0.51
PTPRU-208ENST00000493601 ZFHX2Q9C0A1 2572 aaPredicted RBP18.24■□□□□ 0.51
PTPRU-208ENST00000493601 SMIM28A0A1B0GU29 152 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 PROB1E7EW31 1015 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 ANHXE9PGG2 379 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
PTPRU-208ENST00000493601 POU2F2P09086 479 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 NPR3P17342 541 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 RFX1P22670 979 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 HTR4Q13639 388 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 RAB33AQ14088 237 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 IL17AQ16552 155 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 RINT1Q6NUQ1 792 aa18.23■□□□□ 0.51
PTPRU-208ENST00000493601 C1orf186Q6ZWK4 172 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms