RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 CGRRF1Q99675 332 aa6.73□□□□□ -1.33
NF1-215ENST00000493220 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.73□□□□□ -1.33
NF1-215ENST00000493220 FEZ2Q9UHY8 353 aaPredicted RBP6.73□□□□□ -1.33
NF1-215ENST00000493220 POLIQ9UNA4 740 aa6.73□□□□□ -1.33
NF1-215ENST00000493220 CDY2AQ9Y6F7 541 aa6.73□□□□□ -1.33
NF1-215ENST00000493220 UQCRHLA0A096LP55 91 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 A0A1W2PQC6 194 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 M0QYV0 167 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ACKR2O00590 384 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ADCY6O43306 1168 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 LRRN2O75325 713 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 UQCRHP07919 91 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 SMPD1P17405 629 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 RFC2P35250 354 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 GRIK1P39086 918 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CYP27A1Q02318 531 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ANKRD40Q6AI12 368 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CCDC60Q8IWA6 550 aaPredicted RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 ETNPPLQ8TBG4 499 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 TMC2Q8TDI7 906 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 RSPH1Q8WYR4 309 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 COPS5Q92905 334 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 FAM149B1Q96BN6 582 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 KBTBD4Q9NVX7 518 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CHD4Q14839 1912 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 RASSF10A6NK89 507 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 TBKBP1A7MCY6 615 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 GNA15P30679 374 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ACOT2P49753 483 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 IFFO1Q0D2I5 559 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 HLTFQ14527 1009 aaKnown RBP eCLIP6.72□□□□□ -1.33
NF1-215ENST00000493220 GPAT2Q6NUI2 795 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 TMEM270Q6UE05 265 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 VSTM4Q8IW00 320 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 OTUD6BQ8N6M0 293 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 KIAA1524Q8TCG1 905 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 AFAP1L1Q8TED9 768 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 PANX2Q96RD6 677 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 MYO1FO00160 1098 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ALDH2P05091 517 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 NFKBIAP25963 317 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ACADSBP45954 432 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 SLC12A3P55017 1021 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 RBL2Q08999 1139 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 PRPSAP1Q14558 356 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ABHD15Q6UXT9 468 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 DAAM2Q86T65 1068 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CYP2W1Q8TAV3 490 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ZNF296Q8WUU4 475 aaPredicted RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 CPB2Q96IY4 423 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CCDC77Q9BR77 488 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 TRPV6Q9H1D0 765 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 AGPAT3Q9NRZ7 376 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 MTRF1LQ9UGC7 380 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 STAP1Q9ULZ2 295 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 FAN1Q9Y2M0 1017 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ZC3H11AO75152 810 aaKnown RBP eCLIP6.72□□□□□ -1.33
NF1-215ENST00000493220 LRG1P02750 347 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ABCB4P21439 1286 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CASP1P29466 404 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CASP14P31944 242 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ARL4AP40617 200 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ALDH1A3P47895 512 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CLK2P49760 499 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 ADKP55263 362 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 ZC2HC1CQ53FD0 456 aaPredicted RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 SARM1Q6SZW1 724 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ZNF720Q7Z2F6 126 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 DHX38Q92620 1227 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 TARS2Q9BW92 718 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 SLITRK6Q9H5Y7 841 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 DNAI1Q9UI46 699 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 CPSF3Q9UKF6 684 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 TIAM2Q8IVF5 1701 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 PRRG1O14668 218 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 LHX1P48742 406 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 MRPS9P82933 396 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 RUFY4Q6ZNE9 571 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 IL31RAQ8NI17 732 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 ASNSD1Q9NWL6 643 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 LIMA1Q9UHB6 759 aaKnown RBP6.72□□□□□ -1.33
NF1-215ENST00000493220 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.72□□□□□ -1.33
NF1-215ENST00000493220 COMMD10Q9Y6G5 202 aa6.72□□□□□ -1.33
NF1-215ENST00000493220 UMODL1Q5DID0 1318 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 CNTNAP2Q9UHC6 1331 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 PRPSAP2O60256 369 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 CSPG5O95196 566 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 STAMBPO95630 424 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 KCNA2P16389 499 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 FMO5P49326 533 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 SARNPP82979 210 aaKnown RBP6.71□□□□□ -1.33
NF1-215ENST00000493220 CALCOCO2Q13137 446 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 FAM117BQ6P1L5 589 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 RHOT2Q8IXI1 618 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 GPR161Q8N6U8 529 aaKnown RBP6.71□□□□□ -1.33
NF1-215ENST00000493220 CHAMP1Q96JM3 812 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 SH2D3AQ9BRG2 576 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 HIPK3Q9H422 1215 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 HAUS4Q9H6D7 363 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms