RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 XBP1P17861 261 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 MAPK8IP2Q13387 824 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-204ENST00000493161 SLC44A4Q53GD3 710 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 PPM1LQ5SGD2 360 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 LIN9Q5TKA1 542 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 POTEHQ6S545 545 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 RSPO2Q6UXX9 243 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-204ENST00000493161 NOSTRINQ8IVI9 506 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 SLC7A14Q8TBB6 771 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 BSNDQ8WZ55 320 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 FZD8Q9H461 694 aa15.16■□□□□ 0.02
SAMM50-204ENST00000493161 ZFP37Q9Y6Q3 630 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-204ENST00000493161 ZMYM2Q9UBW7 1377 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 CACNA1IQ9P0X4 2223 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 RECQL4O94761 1208 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 KRT2P35908 639 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 UBXN2BQ14CS0 331 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 MLF2Q15773 248 aaPredicted RBP15.15■□□□□ 0.02
SAMM50-204ENST00000493161 EEF1DP3Q658K8 133 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 CDCA2Q69YH5 1023 aaPredicted RBP15.15■□□□□ 0.02
SAMM50-204ENST00000493161 ZC3H14Q6PJT7 736 aaKnown RBP15.15■□□□□ 0.02
SAMM50-204ENST00000493161 NECAB1Q8N987 351 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 ING5Q8WYH8 240 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 RUBCNQ92622 972 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 CCDC43Q96MW1 224 aaKnown RBP15.15■□□□□ 0.02
SAMM50-204ENST00000493161 MTMR9Q96QG7 549 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 TMEM60Q9H2L4 133 aa15.15■□□□□ 0.02
SAMM50-204ENST00000493161 SPATA6Q9NWH7 488 aaPredicted RBP15.15■□□□□ 0.02
SAMM50-204ENST00000493161 DNMT3BQ9UBC3 853 aaKnown RBP15.15■□□□□ 0.02
SAMM50-204ENST00000493161 NOTCH4Q99466 2003 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 VWA8A3KMH1 1905 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 OTOGLQ3ZCN5 2332 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 FAM170BA6NMN3 283 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 BTBD18B2RXH4 712 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
SAMM50-204ENST00000493161 THP07101 528 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 LIG1P18858 919 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 OR1D2P34982 312 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 FOSBP53539 338 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 AXDND1Q5T1B0 1012 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-204ENST00000493161 CD300LGQ6UXG3 332 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 NPAS3Q8IXF0 933 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 SHDQ96IW2 340 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 PLA2G2FQ9BZM2 168 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 POLD4Q9HCU8 107 aa15.14■□□□□ 0.01
SAMM50-204ENST00000493161 PRMT7Q9NVM4 692 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-204ENST00000493161 NEMFO60524 1076 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 MED24O75448 989 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 LARGE1O95461 756 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 ATP2B1P20020 1258 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 HOXA9P31269 272 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 CSTF1Q05048 431 aaKnown RBP15.13■□□□□ 0.01
SAMM50-204ENST00000493161 RAB33AQ14088 237 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 FAM187BQ17R55 369 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 GLRA4Q5JXX5 417 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 MTSS1LQ765P7 747 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 CATSPER3Q86XQ3 398 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 PRIMPOLQ96LW4 560 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 BCO2Q9BYV7 579 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 CCDC113Q9H0I3 377 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 LTB4R2Q9NPC1 389 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 DLL3Q9NYJ7 618 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 GDAQ9Y2T3 454 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 MIA3Q5JRA6 1907 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
SAMM50-204ENST00000493161 SHISA7A6NL88 538 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 I3L4J1 428 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 NRG2O14511 850 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-204ENST00000493161 N4BP3O15049 544 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 LAMTOR5O43504 91 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 KINO60870 393 aaKnown RBP15.12■□□□□ 0.01
SAMM50-204ENST00000493161 XYLBO75191 536 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 PRKCBP05771 671 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 XRCC6P12956 609 aaKnown RBP eCLIP15.12■□□□□ 0.01
SAMM50-204ENST00000493161 FGFR3P22607 806 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 PRKCQQ04759 706 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 PRPF4BQ13523 1007 aaKnown RBP15.12■□□□□ 0.01
SAMM50-204ENST00000493161 PUM1Q14671 1186 aaKnown RBP eCLIP15.12■□□□□ 0.01
SAMM50-204ENST00000493161 RSPO4Q2I0M5 234 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-204ENST00000493161 SLC5A9Q2M3M2 681 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 PABPC1LQ4VXU2 614 aaKnown RBP15.12■□□□□ 0.01
SAMM50-204ENST00000493161 TSSK4Q6SA08 328 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 ZBTB8OSQ8IWT0 167 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 C3orf58Q8NDZ4 430 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 MCRS1Q96EZ8 462 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 KIFC3Q9BVG8 833 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 MTRRQ9UBK8 725 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 CDY1Q9Y6F8 540 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 GPR179Q6PRD1 2367 aa15.12■□□□□ 0.01
SAMM50-204ENST00000493161 TARSP26639 723 aaKnown RBP15.11■□□□□ 0.01
SAMM50-204ENST00000493161 TKTP29401 623 aaKnown RBP15.11■□□□□ 0.01
SAMM50-204ENST00000493161 BRCC3P46736 316 aa15.11■□□□□ 0.01
SAMM50-204ENST00000493161 CLCNKBP51801 687 aa15.11■□□□□ 0.01
SAMM50-204ENST00000493161 ELAVL2Q12926 359 aaKnown RBP15.11■□□□□ 0.01
SAMM50-204ENST00000493161 FZD5Q13467 585 aa15.11■□□□□ 0.01
SAMM50-204ENST00000493161 ME3Q16798 604 aa15.11■□□□□ 0.01
SAMM50-204ENST00000493161 TMEM132AQ24JP5 1023 aa15.11■□□□□ 0.01
SAMM50-204ENST00000493161 ZNF528Q3MIS6 628 aa15.11■□□□□ 0.01
SAMM50-204ENST00000493161 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms