RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 POLR3FQ9H1D9 316 aaPredicted RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 LTB4R2Q9NPC1 389 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 PRMT7Q9NVM4 692 aaPredicted RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 KCNH3Q9ULD8 1083 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 POLIQ9UNA4 740 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 DOCK6Q96HP0 2047 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 CASTOR2A6NHX0 329 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 LRRIQ4A6NIV6 560 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 FAM170BA6NMN3 283 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 N4BP3O15049 544 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 NCAM2O15394 837 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 THP07101 528 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 RARRES1P49788 294 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 CSTF1Q05048 431 aaKnown RBP12.18□□□□□ -0.46
SND1-215ENST00000492772 UVSSAQ2YD98 709 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 PABPC1LQ4VXU2 614 aaKnown RBP12.18□□□□□ -0.46
SND1-215ENST00000492772 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.18□□□□□ -0.46
SND1-215ENST00000492772 CEP57Q86XR8 500 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 ZBTB8OSQ8IWT0 167 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 NPAS3Q8IXF0 933 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 NELL2Q99435 816 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 HSD17B14Q9BPX1 270 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 KXD1Q9BQD3 176 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 TM6SF1Q9BZW5 370 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 EPC1Q9H2F5 836 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 ZSCAN32Q9NX65 697 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 CACNG4Q9UBN1 327 aa12.18□□□□□ -0.46
SND1-215ENST00000492772 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
SND1-215ENST00000492772 SMG5Q9UPR3 1016 aaKnown RBP12.18□□□□□ -0.46
SND1-215ENST00000492772 PRR5-ARHGAP8B1AHC4 643 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 PTGESO14684 152 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
SND1-215ENST00000492772 ECI2O75521 394 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 RPS9P46781 194 aaKnown RBP12.17□□□□□ -0.46
SND1-215ENST00000492772 ARHGAP8P85298 464 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 LMNB2Q03252 620 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 RAB33AQ14088 237 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 CALCRLQ16602 461 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 FAM187BQ17R55 369 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 AXDND1Q5T1B0 1012 aaPredicted RBP12.17□□□□□ -0.46
SND1-215ENST00000492772 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
SND1-215ENST00000492772 TPRG1Q6ZUI0 275 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 ZBTB44Q8NCP5 570 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 MCPH1Q8NEM0 835 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 ITFG1Q8TB96 612 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 BRMS1Q9HCU9 246 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 MTRRQ9UBK8 725 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 PCDHA12Q9UN75 941 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 MRPS17Q9Y2R5 130 aaKnown RBP12.17□□□□□ -0.46
SND1-215ENST00000492772 EPG5Q9HCE0 2579 aa12.17□□□□□ -0.46
SND1-215ENST00000492772 KMT2BQ9UMN6 2715 aaPredicted RBP12.17□□□□□ -0.46
SND1-215ENST00000492772 GPR179Q6PRD1 2367 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 NOTCH4Q99466 2003 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 TMEM189-UBE2V1I3L0A0 370 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 LILRB5O75023 590 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 RECQL4O94761 1208 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 XRCC6P12956 609 aaKnown RBP eCLIP12.16□□□□□ -0.46
SND1-215ENST00000492772 OR1D2P34982 312 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 KRT2P35908 639 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 RBM25P49756 843 aaKnown RBP12.16□□□□□ -0.46
SND1-215ENST00000492772 SCRN1Q12765 414 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 NAB2Q15742 525 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 TMEM132AQ24JP5 1023 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 WASF1Q92558 559 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 NELL1Q92832 810 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 DNASE1L2Q92874 299 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 ADPGKQ9BRR6 497 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 FAM126AQ9BYI3 521 aaPredicted RBP12.16□□□□□ -0.46
SND1-215ENST00000492772 FZD8Q9H461 694 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 PDZD7Q9H5P4 517 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 PRMT8Q9NR22 394 aaPredicted RBP12.16□□□□□ -0.46
SND1-215ENST00000492772 GDE1Q9NZC3 331 aa12.16□□□□□ -0.46
SND1-215ENST00000492772 CDV3Q9UKY7 258 aaKnown RBP12.16□□□□□ -0.46
SND1-215ENST00000492772 MRPS23Q9Y3D9 190 aaKnown RBP12.16□□□□□ -0.46
SND1-215ENST00000492772 MTF2Q9Y483 593 aaPredicted RBP12.16□□□□□ -0.46
SND1-215ENST00000492772 CACNA1BQ00975 2339 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 COL4A2P08572 1712 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 ADAM12O43184 909 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 TBC1D4O60343 1298 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 NEMFO60524 1076 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 CD72P21854 359 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 FGFR3P22607 806 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 TARSP26639 723 aaKnown RBP12.15□□□□□ -0.46
SND1-215ENST00000492772 PRPF4BQ13523 1007 aaKnown RBP12.15□□□□□ -0.46
SND1-215ENST00000492772 MAPK6Q16659 721 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 EARS2Q5JPH6 523 aaKnown RBP12.15□□□□□ -0.46
SND1-215ENST00000492772 ZNF852Q6ZMS4 543 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 ING5Q8WYH8 240 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 UROC1Q96N76 676 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
SND1-215ENST00000492772 IER2Q9BTL4 223 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
SND1-215ENST00000492772 AVENQ9NQS1 362 aaPredicted RBP12.15□□□□□ -0.46
SND1-215ENST00000492772 PDRG1Q9NUG6 133 aa12.15□□□□□ -0.46
SND1-215ENST00000492772 HCFC1R1Q9NWW0 138 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms