RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	POU2F2	P09086	479 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	GP1BB	P13224	206 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	PTPN2	P17706	415 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ATP4A	P20648	1035 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	EIF2S3	P41091	472 aa	Known RBP	6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	DGKE	P52429	567 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	RIPPLY3	P57055	190 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	PLCB2	Q00722	1185 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	HNRNPU	Q00839	825 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	UVSSA	Q2YD98	709 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	C4orf17	Q53FE4	359 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	USP39	Q53GS9	565 aa	Known RBP	6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	RTP2	Q5QGT7	225 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ZMYM1	Q5SVZ6	1142 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ARMCX6	Q7L4S7	300 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	TMPRSS7	Q7RTY8	843 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	PRICKLE2	Q7Z3G6	844 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	SLCO6A1	Q86UG4	719 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	C11orf74	Q86VG3	221 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	IQCA1	Q86XH1	822 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	CCDC60	Q8IWA6	550 aa	Predicted RBP	6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	GPR65	Q8IYL9	337 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	MIER1	Q8N108	512 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ESR2	Q92731	530 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	TCEAL4	Q96EI5	215 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ZSWIM3	Q96MP5	696 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	CORO1B	Q9BR76	489 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	GCOM2	Q9BZD3	368 aa	Predicted RBP	6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	TRIM4	Q9C037	500 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	LRRCC1	Q9C099	1032 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	SEMA4C	Q9C0C4	833 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ZNF302	Q9NR11	478 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	TMEM74B	Q9NUR3	256 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	GTSE1	Q9NYZ3	720 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ANKMY1	Q9P2S6	941 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	SEPT9	Q9UHD8	586 aa	Predicted RBP	6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	PAXBP1	Q9Y5B6	917 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	PCDHB2	Q9Y5E7	798 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	UBIAD1	Q9Y5Z9	338 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ABCA7	Q8IZY2	2146 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	NOTCH4	Q99466	2003 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	UBR5	O95071	2799 aa	Predicted RBP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	NCAN	O14594	1321 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	IGKV6D-21	A0A0A0MT36	114 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	WDR27	A2RRH5	827 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	PALM3	A6NDB9	673 aa	Predicted RBP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	DDX39A	O00148	427 aa	Known RBP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	CHAD	O15335	359 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	RRP8	O43159	456 aa	Known RBP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	ADAM12	O43184	909 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	SMARCA5	O60264	1052 aa	Predicted RBP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	RNF40	O75150	1001 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	HMMR	O75330	724 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	TADA2A	O75478	443 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	ATG7	O95352	703 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	APBB3	O95704	486 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	FGA	P02671	866 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	CFI	P05156	583 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	C6	P13671	934 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	CD59	P13987	128 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	BCKDHB	P21953	392 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	SFPQ	P23246	707 aa	Known RBP eCLIP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	CXADR	P78310	365 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	LY6D	Q14210	128 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	GRM4	Q14833	912 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	PSMD5	Q16401	504 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	CCDC178	Q5BJE1	867 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	PRSS36	Q5K4E3	855 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	TSHZ3	Q63HK5	1081 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	DIEXF	Q68CQ4	756 aa	Known RBP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	SWSAP1	Q6NVH7	229 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	SLC23A3	Q6PIS1	610 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	ABHD15	Q6UXT9	468 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	CEP57	Q86XR8	500 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	FMNL3	Q8IVF7	1028 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	MINDY1	Q8N5J2	469 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	OR2I1P	Q8NGU4	316 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	RABGGTA	Q92696	567 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	TMEM209	Q96SK2	561 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	KIF2C	Q99661	725 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	TPSD1	Q9BZJ3	242 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	AVEN	Q9NQS1	362 aa	Predicted RBP	6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	KCNH7	Q9NS40	1196 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	ADAM28	Q9UKQ2	775 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	CEP131	Q9UPN4	1083 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	EML5	Q05BV3	1969 aa		6.07	□□□□□ -1.44
SEC13-219	ENST00000492602	NFASC	O94856	1347 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	ATXN2	Q99700	1313 aa	Known RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	CNTNAP2	Q9UHC6	1331 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602		A0A087WZ62	844 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	PNMA6F	A0A0J9YX94	578 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	FAM149A	A5PLN7	773 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	ZNF197	O14709	1029 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	MEIS2	O14770	477 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	LRG1	P02750	347 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	KRT10	P13645	584 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	KIF5B	P33176	963 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	OR1D2	P34982	312 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	IL12RB1	P42701	662 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms