RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 CCT2P78371 535 aaKnown RBP14.55□□□□□ -0.08
HDAC3-213ENST00000492506 PRKCQQ04759 706 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 MBTD1Q05BQ5 628 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 MLF2Q15773 248 aaPredicted RBP14.55□□□□□ -0.08
HDAC3-213ENST00000492506 SLC44A4Q53GD3 710 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 LRSAM1Q6UWE0 723 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 C4orf19Q8IY42 314 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 ZBTB44Q8NCP5 570 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 TCP11Q8WWU5 503 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 JAKMIP1Q96N16 626 aaKnown RBP14.55□□□□□ -0.08
HDAC3-213ENST00000492506 CLSTN3Q9BQT9 956 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 PAAF1Q9BRP4 392 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 APOL6Q9BWW8 343 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 BCO2Q9BYV7 579 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 OSBPL6Q9BZF3 934 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 SPATA6Q9NWH7 488 aaPredicted RBP14.55□□□□□ -0.08
HDAC3-213ENST00000492506 CALCOCO1Q9P1Z2 691 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 CACNG4Q9UBN1 327 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 PCDHGA2Q9Y5H1 932 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 SNX14Q9Y5W7 946 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 CHD6Q8TD26 2715 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 USP24Q9UPU5 2620 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 FAM170BA6NMN3 283 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 LAMTOR5O43504 91 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 DKC1O60832 514 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDAC3-213ENST00000492506 HNRNPA1P09651 372 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDAC3-213ENST00000492506 RPS6KB1P23443 525 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 AKAP5P24588 427 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 CREMQ03060 361 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 POU5F1BQ06416 359 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 INF2Q27J81 1249 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 ZSCAN23Q3MJ62 389 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 BLOC1S2Q6QNY1 142 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 ITFG1Q8TB96 612 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 HAS1Q92839 578 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 CLDN23Q96B33 292 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 FAM20AQ96MK3 541 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 LXNQ9BS40 222 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 EPC1Q9H2F5 836 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 RGL1Q9NZL6 768 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 NCDNQ9UBB6 729 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 COL4A2P08572 1712 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 F5P12259 2224 aa14.54□□□□□ -0.08
HDAC3-213ENST00000492506 ZMYM2Q9UBW7 1377 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 SHISA7A6NL88 538 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 PTMAP06454 111 aaKnown RBP14.53□□□□□ -0.08
HDAC3-213ENST00000492506 CD72P21854 359 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 HOXA9P31269 272 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 HSPA4P34932 840 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 CSTF1Q05048 431 aaKnown RBP14.53□□□□□ -0.08
HDAC3-213ENST00000492506 SPIRE1Q08AE8 756 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 GRIK3Q13003 919 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 FZD5Q13467 585 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 MXD4Q14582 209 aaPredicted RBP14.53□□□□□ -0.08
HDAC3-213ENST00000492506 UBXN2BQ14CS0 331 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 EPHA7Q15375 998 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 RSPO2Q6UXX9 243 aaPredicted RBP14.53□□□□□ -0.08
HDAC3-213ENST00000492506 MTSS1LQ765P7 747 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 GPR161Q8N6U8 529 aaKnown RBP14.53□□□□□ -0.08
HDAC3-213ENST00000492506 LNX1Q8TBB1 728 aaPredicted RBP14.53□□□□□ -0.08
HDAC3-213ENST00000492506 PIK3R5Q8WYR1 880 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 AIFM3Q96NN9 605 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 MTRQ99707 1265 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 LTB4R2Q9NPC1 389 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 KLK14Q9P0G3 267 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 RALGAPA1Q6GYQ0 2036 aa14.53□□□□□ -0.08
HDAC3-213ENST00000492506 SF3B1O75533 1304 aaKnown RBP eCLIP14.52□□□□□ -0.085e-8■■■■■ 129.2
HDAC3-213ENST00000492506 INO80B-WBP1J3KQ70 363 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 ADAM12O43184 909 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 B4GALT5O43286 388 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 TADA2AO75478 443 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 C8AP07357 584 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 CAPSQ13938 189 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 XKR9Q5GH70 373 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 PPP4R3AQ6IN85 833 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 POTEHQ6S545 545 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 CDR2LQ86X02 465 aaPredicted RBP14.52□□□□□ -0.09
HDAC3-213ENST00000492506 ASAP3Q8TDY4 903 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 KXD1Q9BQD3 176 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 SPTLC3Q9NUV7 552 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 ZSCAN32Q9NX65 697 aa14.52□□□□□ -0.09
HDAC3-213ENST00000492506 SMG5Q9UPR3 1016 aaKnown RBP14.52□□□□□ -0.09
HDAC3-213ENST00000492506 A0A1B0GUA9 196 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 CCL16O15467 120 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 SLITRK3O94933 977 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 DEXIO95424 95 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 POU2F2P09086 479 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 SDHBP21912 280 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 TARSP26639 723 aaKnown RBP14.51□□□□□ -0.09
HDAC3-213ENST00000492506 ARL2P36404 184 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 MAGEA9P43362 315 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 PFKPQ01813 784 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 SSRP1Q08945 709 aaKnown RBP14.51□□□□□ -0.09
HDAC3-213ENST00000492506 CTTNQ14247 550 aaKnown RBP14.51□□□□□ -0.09
HDAC3-213ENST00000492506 PPM1LQ5SGD2 360 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 ZBTB41Q5SVQ8 909 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 FAM171A1Q5VUB5 890 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 GALNT17Q6IS24 598 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 SLC27A1Q6PCB7 646 aa14.51□□□□□ -0.09
HDAC3-213ENST00000492506 TSSK4Q6SA08 328 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms