RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SMOC1Q9H4F8 434 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 IFT122Q9HBG6 1241 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 PCDHB2Q9Y5E7 798 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 EML5Q05BV3 1969 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 NID2Q14112 1375 aa13.08□□□□□ -0.31
CACNA1C-228ENST00000492150 NUP205Q92621 2012 aa13.08□□□□□ -0.31
CACNA1C-228ENST00000492150 CFAP46Q8IYW2 2715 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 CCDC163A0A0D9SF12 145 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 NRP1O14786 923 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 AKAP3O75969 853 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 SOD2P04179 222 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 ALDH2P05091 517 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 HOXA11P31270 313 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 IRX6P78412 446 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 SCAPQ12770 1279 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 KRT32Q14532 448 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 Q4G0T1 1027 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 UBXN11Q5T124 520 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 TCEAL6Q6IPX3 200 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 Q6ZUG5 572 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 ANO5Q75V66 913 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 URGCPQ8TCY9 931 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 TBCKQ8TEA7 893 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 HNRNPLLQ8WVV9 542 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 BRF1Q92994 677 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 TCEAL3Q969E4 200 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 PGBD4Q96DM1 585 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 KXD1Q9BQD3 176 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 AGPAT5Q9NUQ2 364 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 VPS54Q9P1Q0 977 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 FAN1Q9Y2M0 1017 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 NOTCH4Q99466 2003 aa13.08□□□□□ -0.32
CACNA1C-228ENST00000492150 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 TDP2O95551 362 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 EFEMP2O95967 443 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 CYP3A7P24462 503 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 AK2P54819 239 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 PTGDRQ13258 359 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 TMEFF1Q8IYR6 380 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 FAM3CQ92520 227 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 NLRP4Q96MN2 994 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 HERC2P3Q9BVR0 1158 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 MINDY3Q9H8M7 445 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 RSAD1Q9HA92 442 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 TRPV5Q9NQA5 729 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 MARCH5Q9NX47 278 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 KANSL3Q9P2N6 904 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 URB1O60287 2271 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 CACNA1EQ15878 2313 aa13.07□□□□□ -0.32
CACNA1C-228ENST00000492150 PDCD11Q14690 1871 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 LNP1A1A4G5 178 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 C2CD2LO14523 706 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 ZMYND10O75800 440 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 RPP40O75818 363 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 POMCP01189 267 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 MYBP10242 640 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 BMP2KLQ5H9B9 411 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 PLA2G4FQ68DD2 849 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 LILRA6Q6PI73 481 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 KBTBD6Q86V97 674 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 RNF168Q8IYW5 571 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 ETNPPLQ8TBG4 499 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 KCNB2Q92953 911 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 MBOAT7Q96N66 472 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 FAM193BQ96PV7 902 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 SLC26A6Q9BXS9 759 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 CCDC86Q9H6F5 360 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 TMEM9BQ9NQ34 198 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 CNTNAP2Q9UHC6 1331 aa13.06□□□□□ -0.32
CACNA1C-228ENST00000492150 PTPN13Q12923 2485 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 EML1O00423 815 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 ATXN7O15265 892 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 TGM5O43548 720 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 GAS2O43903 313 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 NTRK1P04629 796 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 IFNAR1P17181 557 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 RDXP35241 583 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 NPEPPSP55786 919 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 PSMC5P62195 406 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 SRSF1Q07955 248 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 GRASPQ7Z6J2 395 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 COLGALT2Q8IYK4 626 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 GPR65Q8IYL9 337 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 FBXL16Q8N461 479 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 PRPF31Q8WWY3 499 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 JPH2Q9BR39 696 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms