RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 MAPTP10636 758 aaKnown RBP16.44■□□□□ 0.22
TOM1-215ENST00000491987 MCF2P10911 925 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 PROZP22891 400 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 MARCKSP29966 332 aaPredicted RBP16.44■□□□□ 0.22
TOM1-215ENST00000491987 CEBPZQ03701 1054 aaKnown RBP16.44■□□□□ 0.22
TOM1-215ENST00000491987 MCM6Q14566 821 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 SPECC1Q5M775 1068 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 RTP2Q5QGT7 225 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 ATAT1Q5SQI0 421 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 PRSS55Q6UWB4 352 aaPredicted RBP16.44■□□□□ 0.22
TOM1-215ENST00000491987 PALB2Q86YC2 1186 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 RAD54LQ92698 747 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 ZBTB45Q96K62 511 aaPredicted RBP16.44■□□□□ 0.22
TOM1-215ENST00000491987 PPP1R10Q96QC0 940 aaKnown RBP16.44■□□□□ 0.22
TOM1-215ENST00000491987 GOLGA2P5Q9HBQ8 144 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 TOPORSQ9NS56 1045 aaPredicted RBP16.44■□□□□ 0.22
TOM1-215ENST00000491987 ANKFY1Q9P2R3 1169 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 KCNG1Q9UIX4 513 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 ODF2LQ9ULJ1 636 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 MTMR6Q9Y217 621 aa16.44■□□□□ 0.22
TOM1-215ENST00000491987 C2CD4DB7Z1M9 353 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 KRT18P05783 430 aaKnown RBP16.43■□□□□ 0.22
TOM1-215ENST00000491987 SPATA31D3P0C874 917 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 RPL17P18621 184 aaKnown RBP16.43■□□□□ 0.22
TOM1-215ENST00000491987 IGFBP6P24592 240 aaPredicted RBP16.43■□□□□ 0.22
TOM1-215ENST00000491987 NCKAP1LP55160 1127 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 FAM171A1Q5VUB5 890 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 SPATA31D4Q6ZUB0 917 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 USP49Q70CQ1 688 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 GPR149Q86SP6 731 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 CEP57Q86XR8 500 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 EDAQ92838 391 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 EPSTI1Q96J88 318 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 SNX27Q96L92 541 aa16.43■□□□□ 0.22
TOM1-215ENST00000491987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.43■□□□□ 0.22
TOM1-215ENST00000491987 LARSQ9P2J5 1176 aaKnown RBP16.43■□□□□ 0.22
TOM1-215ENST00000491987 FBXO2Q9UK22 296 aaPredicted RBP16.43■□□□□ 0.22
TOM1-215ENST00000491987 SMIM28A0A1B0GU29 152 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 TOM1L1O75674 476 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 FAM13AO94988 1023 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 BRD1O95696 1058 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 CLCNKBP51801 687 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 CREMQ03060 361 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 NOLC1Q14978 699 aaKnown RBP eCLIP16.42■□□□□ 0.22
TOM1-215ENST00000491987 SEZ6Q53EL9 994 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 ZPBP2Q6X784 338 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 HAUS6Q7Z4H7 955 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 GPR65Q8IYL9 337 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 MYCT1Q8N699 235 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 LARP4BQ92615 738 aaKnown RBP16.42■□□□□ 0.22
TOM1-215ENST00000491987 ACAP3Q96P50 834 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 TTPALQ9BTX7 342 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 ZHX3Q9H4I2 956 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 FNIP2Q9P278 1114 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 HCN4Q9Y3Q4 1203 aa16.42■□□□□ 0.22
TOM1-215ENST00000491987 MYH11P35749 1972 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 H0YCG3 227 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 K7ENM7 598 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 TGM5O43548 720 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 STX6O43752 255 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 RFPL2O75678 378 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 B3GAT3O94766 335 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 MATR3P43243 847 aaKnown RBP eCLIP16.41■□□□□ 0.22
TOM1-215ENST00000491987 ZXDAP98168 799 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 ELAVL2Q12926 359 aaKnown RBP16.41■□□□□ 0.22
TOM1-215ENST00000491987 PTPN21Q16825 1174 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 XKR4Q5GH76 650 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 ELMSAN1Q6PJG2 1045 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 DCLRE1AQ6PJP8 1040 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 ALKAL1Q6UXT8 129 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 CCDC149Q6ZUS6 474 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 TDRD5Q8NAT2 981 aaKnown RBP16.41■□□□□ 0.22
TOM1-215ENST00000491987 PIK3R5Q8WYR1 880 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 BICD1Q96G01 975 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 UROC1Q96N76 676 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 ZMAT2Q96NC0 199 aaKnown RBP16.41■□□□□ 0.22
TOM1-215ENST00000491987 CLIC6Q96NY7 704 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 PARVGQ9HBI0 331 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 DPP7Q9UHL4 492 aa16.41■□□□□ 0.22
TOM1-215ENST00000491987 SRPRBQ9Y5M8 271 aaKnown RBP16.41■□□□□ 0.22
TOM1-215ENST00000491987 DENND4AQ7Z401 1863 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 CCDC195A0A1B0GUA6 201 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 TMEM189-UBE2V1I3L0A0 370 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 I3L4J1 428 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 CLDN3O15551 220 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 MEFVO15553 781 aaPredicted RBP16.4■□□□□ 0.22
TOM1-215ENST00000491987 TBCAO75347 108 aaKnown RBP16.4■□□□□ 0.22
TOM1-215ENST00000491987 ZNF131P52739 623 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 SOX4Q06945 474 aaPredicted RBP16.4■□□□□ 0.22
TOM1-215ENST00000491987 MCL1Q07820 350 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 PSMD5Q16401 504 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 UPP1Q16831 310 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 TRIM67Q6ZTA4 783 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 HFE2Q6ZVN8 426 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 C3orf58Q8NDZ4 430 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 CMASQ8NFW8 434 aaPredicted RBP16.4■□□□□ 0.22
TOM1-215ENST00000491987 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
TOM1-215ENST00000491987 SNX21Q969T3 373 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms