RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CLCN5P51795 746 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 STRN3Q13033 797 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 UVSSAQ2YD98 709 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 C8orf34Q49A92 452 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 LIN9Q5TKA1 542 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 ARL6IP4Q66PJ3 421 aaKnown RBP9.62□□□□□ -0.87
NUP50-217ENST00000491860 DCLRE1AQ6PJP8 1040 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 TAS1R1Q7RTX1 841 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 CDR2LQ86X02 465 aaPredicted RBP9.62□□□□□ -0.87
NUP50-217ENST00000491860 PIK3R5Q8WYR1 880 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 BSNDQ8WZ55 320 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 SMG7Q92540 1137 aaKnown RBP9.62□□□□□ -0.87
NUP50-217ENST00000491860 CDK5RAP3Q96JB5 506 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 KIF2CQ99661 725 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 GPR62Q9BZJ7 368 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 PRKD2Q9BZL6 878 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 KMT5AQ9NQR1 393 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.62□□□□□ -0.87
NUP50-217ENST00000491860 KLK14Q9P0G3 267 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 DUSP12Q9UNI6 340 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.62□□□□□ -0.87
NUP50-217ENST00000491860 CACNA1AO00555 2505 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 CITO14578 2027 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 MYH11P35749 1972 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 A0A087WWV3 80 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 CASTOR2A6NHX0 329 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 CCDC169A6NNP5 214 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 PTGESO14684 152 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 XYLBO75191 536 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 ZMYND10O75800 440 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 PDGFBP01127 241 aaPredicted RBP9.61□□□□□ -0.87
NUP50-217ENST00000491860 WEE2P0C1S8 567 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 MCF2P10911 925 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 LIG1P18858 919 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 GUCY2CP25092 1073 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 GBP2P32456 591 aaPredicted RBP9.61□□□□□ -0.87
NUP50-217ENST00000491860 GRM5P41594 1212 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 PEX3P56589 373 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 ATP2C1P98194 919 aaPredicted RBP9.61□□□□□ -0.87
NUP50-217ENST00000491860 PSMD5Q16401 504 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 FAM171A1Q5VUB5 890 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 MCTP1Q6DN14 999 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 ASTLQ6HA08 431 aaPredicted RBP9.61□□□□□ -0.87
NUP50-217ENST00000491860 LILRA6Q6PI73 481 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 ANKS3Q6ZW76 656 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 AK8Q96MA6 479 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 RTP3Q9BQQ7 232 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 NTPCRQ9BSD7 190 aaKnown RBP9.61□□□□□ -0.87
NUP50-217ENST00000491860 KCNK12Q9HB15 430 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 ARHGAP28Q9P2N2 729 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 FBXW11Q9UKB1 542 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 FBXL21Q9UKT6 434 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 PCDHB6Q9Y5E3 794 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 FAM186AA6NE01 2351 aa9.61□□□□□ -0.87
NUP50-217ENST00000491860 PTPRZ1P23471 2315 aaPredicted RBP9.61□□□□□ -0.87
NUP50-217ENST00000491860 RIF1Q5UIP0 2472 aaKnown RBP9.6□□□□□ -0.87
NUP50-217ENST00000491860 HIP1RO75146 1068 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 KIF4AO95239 1232 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 ASGR2P07307 311 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 RPL9P32969 192 aaKnown RBP9.6□□□□□ -0.87
NUP50-217ENST00000491860 ID4P47928 161 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 NPTX2P47972 431 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 TOB1P50616 345 aaPredicted RBP9.6□□□□□ -0.87
NUP50-217ENST00000491860 NAB2Q15742 525 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 KYAT1Q16773 422 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 ZNF568Q3ZCX4 644 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 RTP2Q5QGT7 225 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 HYIQ5T013 277 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 RINT1Q6NUQ1 792 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 MPZL3Q6UWV2 235 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 CEP57Q86XR8 500 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 PALB2Q86YC2 1186 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 TMEM105Q8N8V8 129 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 NKD2Q969F2 451 aaPredicted RBP9.6□□□□□ -0.87
NUP50-217ENST00000491860 ACAP3Q96P50 834 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 PPP1R10Q96QC0 940 aaKnown RBP9.6□□□□□ -0.87
NUP50-217ENST00000491860 TSPAN18Q96SJ8 248 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 ACO2Q99798 780 aaKnown RBP9.6□□□□□ -0.87
NUP50-217ENST00000491860 TCHPQ9BT92 498 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 LARSQ9P2J5 1176 aaKnown RBP9.6□□□□□ -0.87
NUP50-217ENST00000491860 WNT16Q9UBV4 365 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 CDH22Q9UJ99 828 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 GDAQ9Y2T3 454 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 BACE2Q9Y5Z0 518 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 TRIP11Q15643 1979 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 DOCK8Q8NF50 2099 aa9.6□□□□□ -0.87
NUP50-217ENST00000491860 E9PMD0 336 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 H7C4K7 107 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 SYN3O14994 580 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 TOM1L1O75674 476 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 RFPL2O75678 378 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 B3GAT3O94766 335 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 SRFP11831 508 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 PLS3P13797 630 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 KCNE1P15382 129 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 FGFR3P22607 806 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 RFX1P22670 979 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 RAB33AQ14088 237 aa9.59□□□□□ -0.87
NUP50-217ENST00000491860 ECM1Q16610 540 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms