RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 CAMK4Q16566 473 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 NELFCDQ8IXH7 590 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 SPATA20Q8TB22 786 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 LPPQ93052 612 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 HPS3Q969F9 1004 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 ZBTB45Q96K62 511 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-214ENST00000491584 ZNF558Q96NG5 402 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 GAD1Q99259 594 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 C11orf84Q9BUA3 381 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-214ENST00000491584 COLEC11Q9BWP8 271 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 CLSTN2Q9H4D0 955 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 NXF3Q9H4D5 531 aaKnown RBP13.01□□□□□ -0.33
PTPN7-214ENST00000491584 EPHX3Q9H6B9 360 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 C11orf16Q9NQ32 467 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 LMCD1Q9NZU5 365 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 DACH1Q9UI36 760 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 USP20Q9Y2K6 914 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 HES2Q9Y543 173 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 MICAL3Q7RTP6 2002 aa13.01□□□□□ -0.33
PTPN7-214ENST00000491584 WDFY4Q6ZS81 3184 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 ANKRD63C9JTQ0 380 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 INPPL1O15357 1258 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 EXTL3O43909 919 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 RECQL4O94761 1208 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 LETM1O95202 739 aaPredicted RBP13□□□□□ -0.33
PTPN7-214ENST00000491584 IL18RAPO95256 599 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 PRR29P0C7W0 189 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 ATF7P17544 494 aaPredicted RBP13□□□□□ -0.33
PTPN7-214ENST00000491584 PLA2G5P39877 138 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 CASP5P51878 434 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 PPP2R3AQ06190 1150 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 GRIK3Q13003 919 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 PTPROQ16827 1216 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 CLLU1OSQ5K130 101 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 TMEM192Q8IY95 271 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 XXYLT1Q8NBI6 393 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 CACTINQ8WUQ7 758 aaKnown RBP13□□□□□ -0.33
PTPN7-214ENST00000491584 CLP1Q92989 425 aaKnown RBP13□□□□□ -0.33
PTPN7-214ENST00000491584 HLA-CQ95604 372 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
PTPN7-214ENST00000491584 DHTKD1Q96HY7 919 aaPredicted RBP13□□□□□ -0.33
PTPN7-214ENST00000491584 UROC1Q96N76 676 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 TMEM175Q9BSA9 504 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 RNF39Q9H2S5 420 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 ASB7Q9H672 318 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 CD320Q9NPF0 282 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 SPG21Q9NZD8 308 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 KLK14Q9P0G3 267 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 FRMD4BQ9Y2L6 1034 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 FAN1Q9Y2M0 1017 aa13□□□□□ -0.33
PTPN7-214ENST00000491584 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 BRWD1Q9NSI6 2320 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.99□□□□□ -0.33
PTPN7-214ENST00000491584 BICDL2A1A5D9 508 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 EXOC3O60645 756 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 FGFR1OPO95684 399 aaKnown RBP12.99□□□□□ -0.33
PTPN7-214ENST00000491584 POMCP01189 267 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 PAX3P23760 479 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 CTNNB1P35222 781 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 MLH1P40692 756 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 KCNA1Q09470 495 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 COBLL1Q53SF7 1204 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 NT5DC4Q86YG4 428 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 GPD1LQ8N335 351 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 MLKLQ8NB16 471 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 NOC3LQ8WTT2 800 aaKnown RBP12.99□□□□□ -0.33
PTPN7-214ENST00000491584 P2RX5Q93086 422 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 FAM212AQ96EL1 285 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 FAM213AQ9BRX8 229 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 TBC1D13Q9NVG8 400 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 DERAQ9Y315 318 aa12.99□□□□□ -0.33
PTPN7-214ENST00000491584 TCHHQ07283 1943 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 SMIM28A0A1B0GU29 152 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 TRAPPC3O43617 180 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 KCNE1P15382 129 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 RPL9P32969 192 aaKnown RBP12.98□□□□□ -0.33
PTPN7-214ENST00000491584 ACOT2P49753 483 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 UBE3AQ05086 875 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 TUSC3Q13454 348 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 EPC2Q52LR7 807 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 SASS6Q6UVJ0 657 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 KCNT2Q6UVM3 1135 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 SLC9A9Q8IVB4 645 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 C12orf56Q8IXR9 622 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 TMEM174Q8WUU8 243 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 PPP2R3CQ969Q6 453 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 FAM122AQ96E09 287 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 TMEM169Q96HH4 297 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 C17orf80Q9BSJ5 609 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 C1QTNF1Q9BXJ1 281 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 PCIF1Q9H4Z3 704 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 AGPAT3Q9NRZ7 376 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 HSPBP1Q9NZL4 362 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
PTPN7-214ENST00000491584 MAN1B1Q9UKM7 699 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 TRAF3IP3Q9Y228 551 aa12.98□□□□□ -0.33
PTPN7-214ENST00000491584 MRPL42Q9Y6G3 142 aaKnown RBP12.98□□□□□ -0.33
PTPN7-214ENST00000491584 ATG2AQ2TAZ0 1938 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms