RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 ZNF701M0R085 212 aaPredicted RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 LYPLA2O95372 231 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 L1CAMP32004 1257 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 UBA7P41226 1012 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 CHRNDQ07001 517 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 SNX1Q13596 522 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 THEMIS2Q5TEJ8 643 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 VSIG1Q86XK7 387 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 FAM71AQ8IYT1 594 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 CERKQ8TCT0 537 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 GTF2IRD1Q9UHL9 959 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 EXOC7Q9UPT5 735 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 DRG1Q9Y295 367 aaKnown RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 FARP1Q9Y4F1 1045 aaPredicted RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 NUMBLQ9Y6R0 609 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 PP2D1A8MPX8 630 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 UBAP1LF5GYI3 381 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 GPR25O00155 361 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 IRF6O14896 467 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 CEP104O60308 925 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 PLA2G6O60733 806 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 DCTN3O75935 186 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 WDR4P57081 412 aaKnown RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 KCNH2Q12809 1159 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 IKQ13123 557 aaPredicted RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 KNOP1Q1ED39 458 aaKnown RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 ALKBH5Q6P6C2 394 aaKnown RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 PGM2L1Q6PCE3 622 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 DDX42Q86XP3 938 aaKnown RBP eCLIP11□□□□□ -0.65
SREBF2-208ENST00000491541 MDM1Q8TC05 714 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 RBM41Q96IZ5 413 aaKnown RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 FBXL18Q96ME1 805 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 TTC25Q96NG3 672 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 SLC2A11Q9BYW1 496 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 PPP1R1BQ9UD71 204 aaPredicted RBP11□□□□□ -0.65
SREBF2-208ENST00000491541 DNM3Q9UQ16 869 aa11□□□□□ -0.65
SREBF2-208ENST00000491541 CHRNB2P17787 502 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 FOXN2P32314 431 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 DHX9Q08211 1270 aaKnown RBP10.99□□□□□ -0.65
SREBF2-208ENST00000491541 SLC4A8Q2Y0W8 1093 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 ELAC2Q9BQ52 826 aaKnown RBP10.99□□□□□ -0.65
SREBF2-208ENST00000491541 PCDHGA4Q9Y5G9 962 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 GTF2H1P32780 548 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 TUBP50607 506 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 NEK3P51956 506 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 DNAJC3Q13217 504 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 USH1GQ495M9 461 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 ZNF449Q6P9G9 518 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 BBOF1Q8ND07 529 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 MGARPQ8TDB4 240 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 MAML3Q96JK9 1138 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 OLFM3Q96PB7 478 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 KRT82Q9NSB4 513 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 RPS6KL1Q9Y6S9 549 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 TMEM221A6NGB7 291 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 KCNK3O14649 394 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 SLC37A4O43826 429 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 SETDB1Q15047 1291 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 SUSD4Q5VX71 490 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 PPP1R2P3Q6NXS1 205 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 FGFBP2Q9BYJ0 223 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 PAPOLBQ9NRJ5 636 aaKnown RBP10.99□□□□□ -0.65
SREBF2-208ENST00000491541 PCMTD2Q9NV79 361 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 GRID1Q9ULK0 1009 aa10.99□□□□□ -0.65
SREBF2-208ENST00000491541 TM9SF1O15321 606 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 FKBP1AP62942 108 aaKnown RBP10.98□□□□□ -0.65
SREBF2-208ENST00000491541 ASIC1P78348 528 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 IFI35P80217 286 aaPredicted RBP10.98□□□□□ -0.65
SREBF2-208ENST00000491541 MXRA7P84157 204 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 PPP2R5CQ13362 524 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 ALCAMQ13740 583 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 NET1Q7Z628 596 aaPredicted RBP10.98□□□□□ -0.65
SREBF2-208ENST00000491541 NIPA2Q8N8Q9 360 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 PHC3Q8NDX5 983 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 MAIP1Q8WWC4 291 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 CALML4Q96GE6 196 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 PPP1R12CQ9BZL4 782 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 VPS11Q9H270 941 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 ATXN10Q9UBB4 475 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 CLUHO75153 1309 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 TJP3O95049 919 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 C8BP07358 591 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 H2AFZP0C0S5 128 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 VHLP40337 213 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 EPS15P42566 896 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 FRG1Q14331 258 aaKnown RBP10.98□□□□□ -0.65
SREBF2-208ENST00000491541 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 H2AFVQ71UI9 128 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 PNMA1Q8ND90 353 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 DIS3LQ8TF46 1054 aaKnown RBP10.98□□□□□ -0.65
SREBF2-208ENST00000491541 CDCA7Q9BWT1 371 aaPredicted RBP10.98□□□□□ -0.65
SREBF2-208ENST00000491541 AP1M1Q9BXS5 423 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 ARHGEF10LQ9HCE6 1279 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 C6orf50Q9HD87 102 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 RASAL2Q9UJF2 1139 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 SMIM31A0A1B0GVY4 71 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 MAGEA13PA6NCF6 341 aa10.98□□□□□ -0.65
SREBF2-208ENST00000491541 GAS8O95995 478 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms