RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SEPT8Q92599 483 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 APBB2Q92870 758 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 ACAP3Q96P50 834 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 NDST4Q9H3R1 872 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 PDE11AQ9HCR9 933 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 IL23AQ9NPF7 189 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 INTS13Q9NVM9 706 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 SNTG2Q9NY99 539 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 LGALS16A8MUM7 142 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 DLATP10515 647 aaKnown RBP23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 KCNH2Q12809 1159 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 RTN4Q9NQC3 1192 aaKnown RBP23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 LRRIQ3A6PVS8 624 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 TULP1O00294 542 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 MEFVO15553 781 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 CBFA2T2O43439 604 aa23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 RAB27AP51159 221 aa23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 NR1I3Q14994 352 aa23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 C1orf220Q5T0J3 134 aa23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 LINC01599Q8WXQ3 324 aa23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 FNBP1Q96RU3 617 aa23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 RGS18Q9NS28 235 aa23.59■■□□□ 1.37
VCPKMT-204ENST00000491402 A0A0U1RQF3 1178 aa23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 RECQL4O94761 1208 aa23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 TCTN1Q2MV58 587 aa23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 SLC10A6Q3KNW5 377 aa23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 FAM43BQ6ZT52 329 aaPredicted RBP23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 RTN4RL1Q86UN2 441 aaPredicted RBP23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 FAM212AQ96EL1 285 aa23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 POP1Q99575 1024 aaKnown RBP23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 APOL6Q9BWW8 343 aa23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 TSPYL2Q9H2G4 693 aaPredicted RBP23.58■■□□□ 1.37
VCPKMT-204ENST00000491402 MICAL3Q7RTP6 2002 aa23.58■■□□□ 1.36
VCPKMT-204ENST00000491402 TTC26A0AVF1 554 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 TEX33O43247 280 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 ADCY5O95622 1261 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 AFPP02771 609 aaKnown RBP23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 TPM3P06753 285 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 AKAP5P24588 427 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 ZNF75DP51815 510 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 CLDN10P78369 228 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 RNF39Q9H2S5 420 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 ZNF623O75123 536 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 IL18RAPO95256 599 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 YARSP54577 528 aaKnown RBP23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 UBXN1Q04323 297 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 PPP3CAQ08209 521 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 PDCD11Q14690 1871 aaKnown RBP23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 SURF1Q15526 300 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 ZNF365Q70YC5 407 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 MMRN2Q9H8L6 949 aa23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 TOPORSQ9NS56 1045 aaPredicted RBP23.57■■□□□ 1.36
VCPKMT-204ENST00000491402 PTPRJQ12913 1337 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 C9IYK1 514 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 SKIP12755 728 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 TNNI1P19237 187 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 FMO5P49326 533 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 CBWD6Q4V339 395 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 CBWD3Q5JTY5 395 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 CBWD5Q5RIA9 395 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 SLC24A5Q71RS6 500 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 HACE1Q8IYU2 909 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 MRFAP1L1Q96HT8 127 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 SNX27Q96L92 541 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 CGRRF1Q99675 332 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 GDF15Q99988 308 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 ASB7Q9H672 318 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 PLEKHA5Q9HAU0 1116 aa23.56■■□□□ 1.36
VCPKMT-204ENST00000491402 LACTBL1A8MY62 500 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 FGBP02675 491 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 PFKMP08237 780 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 ATF7P17544 494 aaPredicted RBP23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 GCLMP48507 274 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 TMEM240Q5SV17 173 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 FKBP15Q5T1M5 1219 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 LMBRD2Q68DH5 695 aaPredicted RBP23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 OTOP2Q7RTS6 562 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 MRPL10Q7Z7H8 261 aaKnown RBP23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 WDR49Q8IV35 697 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 C1orf112Q9NSG2 853 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 PARP2Q9UGN5 583 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 RANBP2P49792 3224 aaKnown RBP23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 MEIS3P2A8K0S8 358 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 STX10O60499 249 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 CNKSR3Q6P9H4 555 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 ECHDC2Q86YB7 292 aa23.55■■□□□ 1.36
VCPKMT-204ENST00000491402 ITGA4P13612 1032 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 GTF2H1P32780 548 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 PTPN21Q16825 1174 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 ALKAL1Q6UXT8 129 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 CD302Q8IX05 232 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 EFCAB13Q8IY85 973 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 ZNF516Q92618 1163 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 LPPQ93052 612 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 FAM84AQ96KN4 292 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 UBE2OQ9C0C9 1292 aaKnown RBP23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 TMEM8AQ9HCN3 771 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 TTC3P53804 2025 aa23.54■■□□□ 1.36
VCPKMT-204ENST00000491402 ENPP3O14638 875 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms