RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 GPHA2Q96T91 129 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 CDC5LQ99459 802 aaKnown RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 MNTQ99583 582 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 FEZ1Q99689 392 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 IKZF4Q9H2S9 585 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 IGSF5Q9NSI5 407 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 LMBRD1Q9NUN5 540 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 BABAM1Q9NWV8 329 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ING3Q9NXR8 418 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 H2AFY2Q9P0M6 372 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 MAGEC2Q9UBF1 373 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 POLKQ9UBT6 870 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 B4GALT6Q9UBX8 382 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNHIT2Q9UHR6 403 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 NOL7Q9UMY1 257 aaKnown RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 TNNQ9UQP3 1299 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 CTDP1Q9Y5B0 961 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 CD2APQ9Y5K6 639 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ANKRD36BQ8N2N9 1353 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 FANCAO15360 1455 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ADGRL1O94910 1474 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 TTC37Q6PGP7 1564 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 PTPRCP08575 1304 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 SOS1Q07889 1333 aaPredicted RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MYPNQ86TC9 1320 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 TRPM2O94759 1503 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MADDQ8WXG6 1647 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 VWDEQ8N2E2 1590 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MED14O60244 1454 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MYOM2P54296 1465 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNF518AQ6AHZ1 1483 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 NRXN1Q9ULB1 1477 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 PRR5-ARHGAP8B1AHC4 643 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 DYNC1I1O14576 645 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 DVL2O14641 736 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 ERC2O15083 957 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 NRP2O60462 931 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 PRAMEF4O60810 478 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 ALDH1A2O94788 518 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 ABHD16AO95870 558 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MBD3O95983 291 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 NUDT3O95989 172 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MCCP23508 829 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 LSP1P33241 339 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 CASRP41180 1078 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 CCT4P50991 539 aaKnown RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 USP14P54578 494 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 PER3P56645 1201 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MXRA7P84157 204 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MGAT5Q09328 741 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 SAFB2Q14151 953 aaKnown RBP eCLIP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 EPHA7Q15375 998 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 GAGE13Q4V321 117 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 TAF7LQ5H9L4 462 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 RABL3Q5HYI8 236 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 LY6G5CQ5SRR4 150 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 TTC22Q5TAA0 569 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 IGFL4Q6B9Z1 124 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 KIAA1841Q6NSI8 718 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 UNQ6494/PRO21346Q6UXR6 183 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 OTOP1Q7RTM1 612 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 BMP8AQ7Z5Y6 402 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 RTN4RL1Q86UN2 441 aaPredicted RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 C16orf71Q8IYS4 520 aaPredicted RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 C8orf58Q8NAV2 365 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 FAM184AQ8NB25 1140 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 GLB1L3Q8NCI6 653 aaPredicted RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 SUPT20HQ8NEM7 779 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 OR2W6PQ8NHA6 318 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 PROKR1Q8TCW9 393 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 LARP4BQ92615 738 aaKnown RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 USP7Q93009 1102 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 TSR2Q969E8 191 aaKnown RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 CAVIN3Q969G5 261 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 SYAP1Q96A49 352 aaPredicted RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 IL17RAQ96F46 866 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 RIOX1Q9H6W3 641 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 MSL2Q9HCI7 577 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 FANCLQ9NW38 375 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 TRPM5Q9NZQ8 1165 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 RNF181Q9P0P0 153 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 STK26Q9P289 416 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 HECAQ9UBI9 543 aaPredicted RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 STAP2Q9UGK3 403 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 ZBTB21Q9ULJ3 1066 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 SPO11Q9Y5K1 396 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 ATP6V1DQ9Y5K8 247 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 DEPDC5O75140 1603 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 SHROOM2Q13796 1616 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 RNF17Q9BXT8 1623 aaKnown RBP2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 SYCP2Q9BX26 1530 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 PPIP5K1Q6PFW1 1433 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 NSD3Q9BZ95 1437 aa2.42□□□□□ -2.02
SNRNP40-207ENST00000491106 TSPOAP1O95153 1857 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 KIAA0232Q92628 1395 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PMS2P1A4D2B8 440 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CBX4O00257 560 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 ELL2O00472 640 aaPredicted RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 NRP1O14786 923 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms