RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 CCDC73Q6ZRK6 1079 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 ZBTB45Q96K62 511 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-206ENST00000490831 SNX27Q96L92 541 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 POP1Q99575 1024 aaKnown RBP16.66■□□□□ 0.26
COL27A1-206ENST00000490831 GPR62Q9BZJ7 368 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 DZANK1Q9NVP4 752 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 TBX20Q9UMR3 447 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 TRIP11Q15643 1979 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 SMIM28A0A1B0GU29 152 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 CASTOR2A6NHX0 329 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-206ENST00000490831 TBCAO75347 108 aaKnown RBP16.65■□□□□ 0.26
COL27A1-206ENST00000490831 KRT18P05783 430 aaKnown RBP16.65■□□□□ 0.26
COL27A1-206ENST00000490831 KCNE1P15382 129 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 CA8P35219 290 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 CLCN4P51793 760 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 ITIH3Q06033 890 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 PKP1Q13835 747 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 USP41Q3LFD5 358 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 SV2BQ7L1I2 683 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 ZBTB33Q86T24 672 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 DNAJC19Q96DA6 116 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 ACAP3Q96P50 834 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 TCHPQ9BT92 498 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 HAPLN2Q9GZV7 340 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 CNTN3Q9P232 1028 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
COL27A1-206ENST00000490831 CACNG4Q9UBN1 327 aa16.65■□□□□ 0.26
COL27A1-206ENST00000490831 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL27A1-206ENST00000490831 MYMKA6NI61 221 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 K7ENM7 598 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 CLDN3O15551 220 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 TADA2AO75478 443 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 KIF4AO95239 1232 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 EPCAMP16422 314 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 CBX2Q14781 532 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-206ENST00000490831 GLRA4Q5JXX5 417 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 MAP4K3Q8IVH8 894 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 DDX12PQ92771 950 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 KHSRPQ92945 711 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL27A1-206ENST00000490831 UROC1Q96N76 676 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 PHF7Q9BWX1 381 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-206ENST00000490831 ADAM7Q9H2U9 754 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL27A1-206ENST00000490831 FNIP2Q9P278 1114 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 SEL1LQ9UBV2 794 aa16.64■□□□□ 0.25
COL27A1-206ENST00000490831 FRMD3A2A2Y4 597 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 LOC730098B7Z3J9 87 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 PI4K2BG5E9Z4 385 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 TEX28O15482 410 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 FAM189A1O60320 539 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 CUTAO60888 179 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 ADH1AP07327 375 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 KLRC2P26717 231 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 SSTR3P32745 418 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-206ENST00000490831 STAT6P42226 847 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 OSTNP61366 133 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 ELAVL2Q12926 359 aaKnown RBP16.63■□□□□ 0.25
COL27A1-206ENST00000490831 E2F4Q16254 413 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 UPP1Q16831 310 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 SLC10A6Q3KNW5 377 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 AXDND1Q5T1B0 1012 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-206ENST00000490831 DCLRE1AQ6PJP8 1040 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 CD300LGQ6UXG3 332 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 ZNF720Q7Z2F6 126 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 KCNG4Q8TDN1 519 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 ZMAT2Q96NC0 199 aaKnown RBP16.63■□□□□ 0.25
COL27A1-206ENST00000490831 STRA6Q9BX79 667 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 PLEKHA5Q9HAU0 1116 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 SLC38A7Q9NVC3 462 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 ANKFY1Q9P2R3 1169 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 CITO14578 2027 aa16.63■□□□□ 0.25
COL27A1-206ENST00000490831 C2CD2LO14523 706 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 PPP1R37O75864 691 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 PAPLNO95428 1278 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 CLTAP09496 248 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 GAP43P17677 238 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 NMT1P30419 496 aaKnown RBP16.62■□□□□ 0.25
COL27A1-206ENST00000490831 LIG4P49917 911 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 CREMQ03060 361 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 SOX4Q06945 474 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-206ENST00000490831 KYAT1Q16773 422 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-206ENST00000490831 KIAA1841Q6NSI8 718 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 SLC39A4Q6P5W5 647 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 SHC4Q6S5L8 630 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 DYMQ7RTS9 669 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 SFR1Q86XK3 245 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-206ENST00000490831 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 HVCN1Q96D96 273 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 BICD1Q96G01 975 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 DDX27Q96GQ7 796 aaKnown RBP16.62■□□□□ 0.25
COL27A1-206ENST00000490831 FBXL18Q96ME1 805 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 CUEDC2Q9H467 287 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 OLFML3Q9NRN5 406 aa16.62■□□□□ 0.25
COL27A1-206ENST00000490831 A0A0B4J269 797 aa16.61■□□□□ 0.25
COL27A1-206ENST00000490831 TTC26A0AVF1 554 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms