RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 HEMGNQ9BXL5 484 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 LIMA1Q9UHB6 759 aaKnown RBP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 MEIS2O14770 477 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 HOXA2O43364 376 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 ZC3H11AO75152 810 aaKnown RBP eCLIP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 ZBTB48P10074 688 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 SLC51AQ86UW1 340 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 ZNF564Q8TBZ8 553 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 PBKQ96KB5 322 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 NIF3L1Q9GZT8 377 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 HOMER3Q9NSC5 361 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 SH3BP5O60239 455 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 ECEL1O95672 775 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 CTNNA1P35221 906 aaKnown RBP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 LBX2Q6XYB7 198 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 SH3BP5LQ7L8J4 393 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 CDKL2Q92772 493 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 RNF25Q96BH1 459 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 APBA2Q99767 749 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 STK33Q9BYT3 514 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 MIF4GDA9UHW6 222 aaKnown RBP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 EML1O00423 815 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 LGALS2P05162 132 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 SLC5A5Q92911 643 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 NUP85Q9BW27 656 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 RUNDC3BQ96NL0 473 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 TRIM62Q9BVG3 475 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 DHX35Q9H5Z1 703 aaKnown RBP15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 RNF14Q9UBS8 474 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 PARP4Q9UKK3 1724 aaKnown RBP15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 CAPN2P17655 700 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 PNPLA4P41247 253 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 HPCAL4Q9UM19 191 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 NR2E3Q9Y5X4 410 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 KRT3P12035 628 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 GUCY2CP25092 1073 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 PLTPP55058 493 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 EFHC2Q5JST6 749 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 ZNF720Q7Z2F6 126 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 DHX40Q8IX18 779 aaKnown RBP15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 RBM41Q96IZ5 413 aaKnown RBP15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 AGPAT1Q99943 283 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 TRPC7Q9HCX4 862 aa15.3■□□□□ 0.04
ARHGEF39-205ENST00000490638 RGS16O15492 202 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 BUB1BO60566 1050 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 EGFRP00533 1210 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 THP07101 528 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 GNL1P36915 607 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 C6orf163Q5TEZ5 329 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 PDXDC1Q6P996 788 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 TTC30AQ86WT1 665 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 GDAP1Q8TB36 358 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 CPB2Q96IY4 423 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 SHPRHQ149N8 1683 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 LMO7Q8WWI1 1683 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 TJP3O95049 919 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 TRIP13Q15645 432 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 ANKS4BQ8N8V4 417 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 SMC6Q96SB8 1091 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 DBR1Q9UK59 544 aaKnown RBP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 PCDHB2Q9Y5E7 798 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 PALMO75781 387 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 FGGP02679 453 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 KRT7P08729 469 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 YAF2Q8IY57 180 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 PPP1R13LQ8WUF5 828 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 PDCD6IPQ8WUM4 868 aaKnown RBP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 DPP3Q9NY33 737 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 CYP3A4P08684 503 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 FGFR4P22455 802 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 PDE1BQ01064 536 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 SLC30A5Q8TAD4 765 aa15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 ABI2Q9NYB9 513 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 KLHL8Q9P2G9 620 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF39-205ENST00000490638 EVI5O60447 810 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 GARTP22102 1010 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 NFKBIAP25963 317 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 TSTA3Q13630 321 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 PTGISQ16647 500 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 CCDC60Q8IWA6 550 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 TJP2Q9UDY2 1190 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 CAPN11Q9UMQ6 739 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 FHOD1Q9Y613 1164 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 HEXIM1O94992 359 aaKnown RBP15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 ELNP15502 786 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 PDGFRAP16234 1089 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 CELF3Q5SZQ8 465 aaKnown RBP15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 TMC7Q7Z402 723 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 CD302Q8IX05 232 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 IL31RAQ8NI17 732 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 NEMP1O14524 444 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 ZBTB39O15060 712 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 ALDH1A3P47895 512 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 SEPT6Q14141 434 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 IQCB1Q15051 598 aa15.28■□□□□ 0.04
ARHGEF39-205ENST00000490638 AMHR2Q16671 573 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms