RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 IGSF9Q9P2J2 1179 aa12.39□□□□□ -0.43
DUBR-204ENST00000490441 CACNG4Q9UBN1 327 aa12.39□□□□□ -0.43
DUBR-204ENST00000490441 DNM3Q9UQ16 869 aa12.39□□□□□ -0.43
DUBR-204ENST00000490441 GDAQ9Y2T3 454 aa12.39□□□□□ -0.43
DUBR-204ENST00000490441 PTPRZ1P23471 2315 aaPredicted RBP12.39□□□□□ -0.43
DUBR-204ENST00000490441 PLXNA3P51805 1871 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 CCDC169A6NNP5 214 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 K7ERI5 159 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 LAD1O00515 517 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 PTGESO14684 152 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
DUBR-204ENST00000490441 KIF4AO95239 1232 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
DUBR-204ENST00000490441 U2AF2P26368 475 aaKnown RBP eCLIP12.38□□□□□ -0.43
DUBR-204ENST00000490441 PTGDRQ13258 359 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 DMP1Q13316 513 aaPredicted RBP12.38□□□□□ -0.43
DUBR-204ENST00000490441 PDIA5Q14554 519 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 E2F4Q16254 413 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 LIN9Q5TKA1 542 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 ATF7IP2Q5U623 682 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 FAM171A1Q5VUB5 890 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 EEF1DP3Q658K8 133 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
DUBR-204ENST00000490441 PDXDC1Q6P996 788 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 PRSS55Q6UWB4 352 aaPredicted RBP12.38□□□□□ -0.43
DUBR-204ENST00000490441 FLCNQ8NFG4 579 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 PAAF1Q9BRP4 392 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 DUSP12Q9UNI6 340 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 USP20Q9Y2K6 914 aa12.38□□□□□ -0.43
DUBR-204ENST00000490441 PHLPP2Q6ZVD8 1323 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 MTCL1Q9Y4B5 1905 aaKnown RBP12.37□□□□□ -0.43
DUBR-204ENST00000490441 ST18O60284 1047 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 RFX1P22670 979 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 CLCN5P51795 746 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 YARSP54577 528 aaKnown RBP12.37□□□□□ -0.43
DUBR-204ENST00000490441 RABEP1Q15276 862 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 PSMD5Q16401 504 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 ECM1Q16610 540 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 MCTP1Q6DN14 999 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 DTHD1Q6ZMT9 781 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 GET4Q7L5D6 327 aaPredicted RBP12.37□□□□□ -0.43
DUBR-204ENST00000490441 C4orf32Q8N8J7 132 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 IGSF22Q8N9C0 903 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 PIK3R5Q8WYR1 880 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 ZNF707Q96C28 371 aaPredicted RBP12.37□□□□□ -0.43
DUBR-204ENST00000490441 DRC1Q96MC2 740 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 PHOX2BQ99453 314 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 CCDC94Q9BW85 323 aaPredicted RBP12.37□□□□□ -0.43
DUBR-204ENST00000490441 PRKD2Q9BZL6 878 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 NT5C3AQ9H0P0 336 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 POLD4Q9HCU8 107 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 FAM86C1Q9NVL1 165 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 EPS15L1Q9UBC2 864 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 PCDHB6Q9Y5E3 794 aa12.37□□□□□ -0.43
DUBR-204ENST00000490441 ZFHX2Q9C0A1 2572 aaPredicted RBP12.36□□□□□ -0.43
DUBR-204ENST00000490441 RIF1Q5UIP0 2472 aaKnown RBP12.36□□□□□ -0.43
DUBR-204ENST00000490441 H0Y858 1186 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 ZMYND10O75800 440 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 B3GAT3O94766 335 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 PRPHP41219 470 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 TOB1P50616 345 aaPredicted RBP12.36□□□□□ -0.43
DUBR-204ENST00000490441 PEX3P56589 373 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 ZRSR1Q15695 479 aaKnown RBP12.36□□□□□ -0.43
DUBR-204ENST00000490441 ZNF568Q3ZCX4 644 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 GLRA4Q5JXX5 417 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 PPM1LQ5SGD2 360 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 NT5DC1Q5TFE4 455 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 LILRA6Q6PI73 481 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.36□□□□□ -0.43
DUBR-204ENST00000490441 TMEM105Q8N8V8 129 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 NXPE3Q969Y0 559 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 MYADMQ96S97 322 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 KIF2CQ99661 725 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 MRPL4Q9BYD3 311 aaKnown RBP12.36□□□□□ -0.43
DUBR-204ENST00000490441 TOPORSQ9NS56 1045 aaPredicted RBP12.36□□□□□ -0.43
DUBR-204ENST00000490441 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.36□□□□□ -0.43
DUBR-204ENST00000490441 TNFSF13BQ9Y275 285 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 DOCK8Q8NF50 2099 aa12.36□□□□□ -0.43
DUBR-204ENST00000490441 E9PMD0 336 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 TRAPPC3O43617 180 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 N4BP1O75113 896 aaKnown RBP12.35□□□□□ -0.43
DUBR-204ENST00000490441 HIP1RO75146 1068 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 XYLBO75191 536 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 EDN1P05305 212 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 C8AP07357 584 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 HNRNPA1P09651 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
DUBR-204ENST00000490441 NPTX2P47972 431 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 C8orf34Q49A92 452 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 RILPL1Q5EBL4 403 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 DCLRE1AQ6PJP8 1040 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 SIX5Q8N196 739 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 LNX1Q8TBB1 728 aaPredicted RBP12.35□□□□□ -0.43
DUBR-204ENST00000490441 UROC1Q96N76 676 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 TCHPQ9BT92 498 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
DUBR-204ENST00000490441 KMT5AQ9NQR1 393 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 FBXW11Q9UKB1 542 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 POLIQ9UNA4 740 aa12.35□□□□□ -0.43
DUBR-204ENST00000490441 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms