RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SNAPC2Q13487 334 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 MTM1Q13496 603 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 SLC9C2Q5TAH2 1124 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ZKSCAN2Q63HK3 967 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 TMEM200BQ69YZ2 307 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 OTUD7BQ6GQQ9 843 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ABRAXAS1Q6UWZ7 409 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ALYREFQ86V81 257 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 FUZQ9BT04 418 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 MUC13Q9H3R2 512 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 SLC22A11Q9NSA0 550 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 LMCD1Q9NZU5 365 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 MSRAQ9UJ68 235 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 PCF11O94913 1555 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 RIMBP3CA6NJZ7 1639 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 RIMBP3BA6NNM3 1639 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 RAPGEF6Q8TEU7 1601 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 RIMBP3Q9UFD9 1639 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 A0A087WWL8 130 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 PGPEP1LA6NFU8 196 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 LRRC10BA6NIK2 292 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 PYGLP06737 847 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 FAHP16930 419 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 RRM1P23921 792 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 SCAND1P57086 179 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 DBPQ10586 325 aaPredicted RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 DUSP28Q4G0W2 176 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 CCDC38Q502W7 563 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 MFSD5Q6N075 450 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 CDPF1Q6NVV7 123 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ARHGAP36Q6ZRI8 547 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 OR1N1Q8NGS0 311 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 CLEC4DQ8WXI8 215 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 MAELQ96JY0 434 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ZCCHC17Q9NP64 241 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 RRN3Q9NYV6 651 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 FBLN5Q9UBX5 448 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 NSFL1CQ9UNZ2 370 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 CCL27Q9Y4X3 112 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 FER1L4A9Z1Z3 1794 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 A0A1W2PQ45 241 aaPredicted RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 A0A1W2PQY0 241 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 CCDC154A6NI56 674 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 IRAK2O43187 625 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ESR1P03372 595 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ANXA2P07355 339 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 HARSP12081 509 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 CKBP12277 381 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ALOX12P18054 663 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 CTXN1P60606 82 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ARL13BQ3SXY8 428 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 SNX30Q5VWJ9 437 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ZSCAN30Q86W11 494 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 SHISA4Q96DD7 197 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 AMNQ9BXJ7 453 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 TOMM22Q9NS69 142 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 HERC5Q9UII4 1024 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 FEM1BQ9UK73 627 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 PLAGL2Q9UPG8 496 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 FAM90A18PA6NE21 464 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 FAM181BA6NEQ2 426 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 FAM90A16PA6NEW6 464 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 FAM90A9PA6NNJ1 464 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 RHPN2P1A8MT19 583 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 FAM90A5PA8MXJ8 464 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 TNFRSF10AO00220 468 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 LILRB5O75023 590 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 ABHD16AO95870 558 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 TFRCP02786 760 aaKnown RBP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 FAM90A15PP0C7V4 464 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 FAM90A14PP0C7W9 464 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 KLRC1P26715 233 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 ZBED6P86452 979 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 TARDBPQ13148 414 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 NFIXQ14938 502 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 MST1LQ2TV78 715 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 CCDC149Q6ZUS6 474 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 TMPRSS9Q7Z410 1059 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 CCDC105Q8IYK2 499 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 TRIM11Q96F44 468 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 MYRFLQ96LU7 910 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 DPH2Q9BQC3 489 aaPredicted RBP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 REEP2Q9BRK0 252 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 METTL22Q9BUU2 404 aaPredicted RBP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 TXLNGYQ9BZA5 131 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 KCTD10Q9H3F6 313 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 ZNF552Q9H707 407 aaPredicted RBP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 PNPOQ9NVS9 261 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 PLA2G3Q9NZ20 509 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 GPR34Q9UPC5 381 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 BTBD3Q9Y2F9 522 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 HECW1Q76N89 1606 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 BCORL1Q5H9F3 1711 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 KIF13AQ9H1H9 1805 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 ZNF541Q9H0D2 1346 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 ZCCHC11Q5TAX3 1644 aaKnown RBP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 PI4KAP2A4QPH2 592 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 APOL1O14791 398 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 FOXP2O15409 715 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 DYRK3O43781 588 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms